Tuple index out of range when importing mordecai

[Jingnan92]

Hello, I follow the instruction to import mordecai and keep getting the error (IndexError: tuple index out of range). Do you have any idea about this? Thanks.

[ahalterman]

Can you provide some more details about when it's happening? Does the error message tell you which line is generating the error? It's possible that you have a mis-match between the version of spaCy that Mordecai requires and the latest (see #69, which I haven't forgotten about but haven't had time to get to)

[Jingnan92]

Thanks for your quick reply. Actually, the error information directs me to exceptions.py line 44.
And I am using Python3.7

[ahalterman]

Which version of spaCy are you using?

[kmcdono2]

Hello - I'm having the same error (code below from my notebook). I have the following python/spacy installs:

spaCy version 2.0.18
Location /opt/anaconda3/lib/python3.7/site-packages/spacy
Platform Darwin-19.4.0-x86_64-i386-64bit
Python version 3.7.4
Models en_core_web_lg

Is this fixable?
Thanks!

geo = Geoparser()

GET http://localhost:9200/geonames/_count [status:404 request:0.171s]
---------------------------------------------------------------------------
NotFoundError                             Traceback (most recent call last)
/opt/anaconda3/lib/python3.7/site-packages/mordecai/geoparse.py in __init__(self, es_hosts, es_port, es_ssl, es_auth, verbose, country_threshold, threads, progress, mod_date, **kwargs)
     63             # with nostderr():
---> 64             self.conn.count()
     65         except:

/opt/anaconda3/lib/python3.7/site-packages/elasticsearch_dsl/search.py in count(self)
    586             body=d,
--> 587             **self._params
    588         )['count']

/opt/anaconda3/lib/python3.7/site-packages/elasticsearch/client/utils.py in _wrapped(*args, **kwargs)
     72                     params[p] = kwargs.pop(p)
---> 73             return func(*args, params=params, **kwargs)
     74         return _wrapped

/opt/anaconda3/lib/python3.7/site-packages/elasticsearch/client/__init__.py in count(self, index, doc_type, body, params)
   1122         return self.transport.perform_request('GET', _make_path(index,
-> 1123             doc_type, '_count'), params=params, body=body)
   1124 

/opt/anaconda3/lib/python3.7/site-packages/elasticsearch/transport.py in perform_request(self, method, url, params, body)
    311             try:
--> 312                 status, headers, data = connection.perform_request(method, url, params, body, ignore=ignore, timeout=timeout)
    313 

/opt/anaconda3/lib/python3.7/site-packages/elasticsearch/connection/http_urllib3.py in perform_request(self, method, url, params, body, timeout, ignore)
    127             self.log_request_fail(method, full_url, url, body, duration, response.status, raw_data)
--> 128             self._raise_error(response.status, raw_data)
    129 

/opt/anaconda3/lib/python3.7/site-packages/elasticsearch/connection/base.py in _raise_error(self, status_code, raw_data)
    124 
--> 125         raise HTTP_EXCEPTIONS.get(status_code, TransportError)(status_code, error_message, additional_info)
    126 

NotFoundError: TransportError(404, 'index_not_found_exception', 'no such index')

During handling of the above exception, another exception occurred:

ConnectionError                           Traceback (most recent call last)
/opt/anaconda3/lib/python3.7/site-packages/IPython/core/interactiveshell.py in run_code(self, code_obj, result, async_)
   3325                 else:
-> 3326                     exec(code_obj, self.user_global_ns, self.user_ns)
   3327             finally:

<ipython-input-3-f5392bd4d871> in <module>
----> 1 geo = Geoparser()

/opt/anaconda3/lib/python3.7/site-packages/mordecai/geoparse.py in __init__(self, es_hosts, es_port, es_ssl, es_auth, verbose, country_threshold, threads, progress, mod_date, **kwargs)
     69 See https://github.com/openeventdata/mordecai#installation-and-requirements
---> 70 for instructions on setting up Geonames/Elasticsearch""".format(es_hosts, es_port))
     71         es_date = utilities.check_geonames_date(self.conn)

<class 'str'>: (<class 'IndexError'>, IndexError('tuple index out of range'))

During handling of the above exception, another exception occurred:

IndexError                                Traceback (most recent call last)
/opt/anaconda3/lib/python3.7/site-packages/IPython/core/interactiveshell.py in run_code(self, code_obj, result, async_)
   3341             if result is not None:
   3342                 result.error_in_exec = sys.exc_info()[1]
-> 3343             self.showtraceback(running_compiled_code=True)
   3344         else:
   3345             outflag = False

/opt/anaconda3/lib/python3.7/site-packages/IPython/core/interactiveshell.py in showtraceback(self, exc_tuple, filename, tb_offset, exception_only, running_compiled_code)
   2043                                             value, tb, tb_offset=tb_offset)
   2044 
-> 2045                     self._showtraceback(etype, value, stb)
   2046                     if self.call_pdb:
   2047                         # drop into debugger

/opt/anaconda3/lib/python3.7/site-packages/ipykernel/zmqshell.py in _showtraceback(self, etype, evalue, stb)
    544             u'traceback' : stb,
    545             u'ename' : unicode_type(etype.__name__),
--> 546             u'evalue' : py3compat.safe_unicode(evalue),
    547         }
    548 

/opt/anaconda3/lib/python3.7/site-packages/ipython_genutils/py3compat.py in safe_unicode(e)
     63     """
     64     try:
---> 65         return unicode_type(e)
     66     except UnicodeError:
     67         pass

/opt/anaconda3/lib/python3.7/site-packages/elasticsearch/exceptions.py in __str__(self)
     67     def __str__(self):
     68         return 'ConnectionError(%s) caused by: %s(%s)' % (
---> 69             self.error, self.info.__class__.__name__, self.info)
     70 
     71 

/opt/anaconda3/lib/python3.7/site-packages/elasticsearch/exceptions.py in error(self)
     42     def error(self):
     43         """ A string error message. """
---> 44         return self.args[1]
     45 
     46     @property

IndexError: tuple index out of range

[ahalterman]

Thanks for the full traceback! It's not a very informative error message, but it's telling you that it can't reach the Elasticsearch index. Are you sure it's up and running?

[kmcdono2]

Ah! I got it working. Yes, I think stopping and restarting Docker was the trick. Sorry for the bother.