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project.yaml
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project.yaml
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# Ignore this`expectation` block. It is required but not used, and will be removed in future versions.
expectations:
population_size: 10000
version: '3.0'
actions:
generate_dataset_table:
run: ehrql:v1 generate-dataset analysis/define_static_dataset.py
--output output/data/dataset_static.csv.gz
outputs:
highly_sensitive:
cohort: output/data/dataset_static.csv.gz
measures_demo:
run: ehrql:v1 generate-measures analysis/measures_demo.py
--output output/measures/measures_demo.csv
--
--start-date "2018-03-23"
--intervals 67
outputs:
moderately_sensitive:
measure_csv: output/measures/measures_demo.csv
measures_demo_imd:
run: ehrql:v1 generate-measures analysis/measures_demo_imd.py
--output output/measures/measures_demo_imd.csv
--
--start-date "2018-03-23"
--intervals 67
outputs:
moderately_sensitive:
measure_csv: output/measures/measures_demo_imd.csv
measures_symptoms:
run: python:latest python analysis/descriptive/measures_symptoms_processing.py
needs: [measures_demo_imd]
outputs:
moderately_sensitive:
table: output/measures/measures_demo_imd_symptoms.csv
measures_cancer_conversion:
run: python:latest python analysis/descriptive/measures_cancer_processing.py
needs: [measures_demo_imd]
outputs:
moderately_sensitive:
table: output/measures/measures_demo_imd_cancerconversion.csv
cohort_descriptive_whole:
run: python:latest python analysis/descriptive/cohort_descriptive.py
needs: [generate_dataset_table]
outputs:
moderately_sensitive:
table: output/data/descriptive_whole_data.csv
generate_referral_test:
run: ehrql:v1 generate-dataset analysis/referral_test.py
--output output/data/referral_test.csv
outputs:
highly_sensitive:
cohort: output/data/referral_test.csv
descriptive_referral_test:
run: python:latest python analysis/descriptive/sum_referral_test.py
needs: [generate_referral_test]
outputs:
moderately_sensitive:
table: output/data/summary_referral_test.csv