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searching for TNF does not give TNF #2079

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deniseOme opened this issue Jun 11, 2019 · 1 comment
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searching for TNF does not give TNF #2079

deniseOme opened this issue Jun 11, 2019 · 1 comment
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Bug Something isn't working Genetics Portal Issues related to Open Targets Genetics Portal

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@deniseOme
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Sanofi user trying to find genetics information from OT genetics portal around TNF. It seems that “TNF” is not showing us as an option from https://genetics.opentargets.org/.

Behaviour has been replicated in production and QA.

Screen Shot 2019-06-11 at 10 18 54

Note that searching for the ENS gene ID of TNF (i.e. ENSG00000232810) does return TNF.

Screen Shot 2019-06-11 at 10 19 31

There are plenty of associations for this gene via several SNPs from GWAS:
https://www.ebi.ac.uk/gwas/genes/TNF

including rs1799964 where nearest gene is TNF on Genetics: https://genetics.opentargets.org/variant/6_31542308_T_C

Is this a problem with search @mkarmona @peatroot @mirandaio @edm1 ?

@deniseOme deniseOme added the Bug Something isn't working label Jun 11, 2019
@peatroot
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Yes, we only show the first ten results of each type (gene, variant, study). The query tnf should probably return TNF above TNF.+, @mkarmona?

@ktsirigos ktsirigos added the Genetics Portal Issues related to Open Targets Genetics Portal label Mar 23, 2022
@ktsirigos ktsirigos transferred this issue from opentargets-archive/genetics Mar 24, 2022
@JarrodBaker JarrodBaker assigned mbdebian and unassigned JarrodBaker Feb 2, 2023
@mbdebian mbdebian closed this as completed Mar 2, 2023
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Labels
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