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The list of current biotypes Ensembl returns
"3prime_overlapping_ncRNA" "antisense" "bidirectional_promoter_lncRNA" "IG_C_gene" "IG_C_pseudogene" "IG_D_gene" "IG_J_gene" "IG_J_pseudogene" "IG_pseudogene" "IG_V_gene" "IG_V_pseudogene" "lincRNA" "macro_lncRNA" "miRNA" "misc_RNA" "Mt_rRNA" "Mt_tRNA" "non_coding" "polymorphic_pseudogene" "processed_pseudogene" "processed_transcript" "protein_coding" "pseudogene" "ribozyme" "rRNA" "rRNA_pseudogene" "scaRNA" "scRNA" "sense_intronic" "sense_overlapping" "snoRNA" "snRNA" "sRNA" "TEC" "transcribed_processed_pseudogene" "transcribed_unitary_pseudogene" "transcribed_unprocessed_pseudogene" "translated_processed_pseudogene" "TR_C_gene" "TR_D_gene" "TR_J_gene" "TR_J_pseudogene" "TR_V_gene" "TR_V_pseudogene" "unitary_pseudogene" "unprocessed_pseudogene" "vaultRNA"
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the curated list of biotypes to exclude for expression_atlas evidences
expression_atlas
"IG_C_pseudogene" "IG_J_pseudogene" "IG_pseudogene" "IG_V_pseudogene" "polymorphic_pseudogene" "processed_pseudogene" "pseudogene" "rRNA" "rRNA_pseudogene" "snoRNA" "snRNA" "transcribed_processed_pseudogene" "transcribed_unitary_pseudogene" "transcribed_unprocessed_pseudogene" "TR_J_pseudogene" "TR_V_pseudogene" "unitary_pseudogene" "unprocessed_pseudogene"
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wip: exclude evidences by gene biotype
5db3baa
Reference # opentargets/issues#369
fix: exclude evidences by gene biotype
ea09ad6
Reference # Closes opentargets/issues#369
mkarmona
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The list of current biotypes Ensembl returns
This feature has to be
The text was updated successfully, but these errors were encountered: