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Plugin: Slide Scanning for Pathology #27

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beniroquai opened this issue Jan 15, 2023 · 1 comment

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beniroquai commented Jan 15, 2023 •

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This will be a thread to collect the WIP for slide scanning in ImSwitch with our XYZ microscope.

I read open-slide is the defacto standard for things like deepzoom and tiled datastorage. It has a python interface https://openslide.org/api/python/
The Napari lazy loading interface for openslide can be handy https://www.napari-hub.org/plugins/napari-lazy-openslide?s=09

Motivational graphic

from https://github.com/manzt/napari-lazy-openslide

The text was updated successfully, but these errors were encountered:

beniroquai assigned beniroquai and renerichter

beniroquai added the enhancement label

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beniroquai commented Jan 24, 2023

update: The scanning is working.

Next step=> Integrate into OpenSlide

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