If we put all the preceding steps together:
../../../../tests/test_beginnersGuide.py
Here we processed just 3 files, but the same procedure can be applied to an entire day of analyses, and takes just a little longer.
The processing stage most likely to modify your results is filtering. There are a number of filters available, ranging from simple concentration thresholds (~latools.analyse.filter_threshold, as above) to advanced multi-dimensional clustering algorithms (~latools.analyse.filter_clustering). We recommend you read and understand the section on advanced_filtering before applying filters to your data.
Before you try to analyse your own data, you must configure latools to work with your particular instrument/standards. To do this, follow the configuration guide.
We also highly recommend that you read through the advanced_topics, so you understand how latools works before you start using it.