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results.xml
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<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="pytest" errors="3" failures="0" skipped="0" tests="5" time="2.281" timestamp="2023-03-01T09:38:16.188285" hostname="OLI-OMEN"><testcase classname="examples.streamlit_app" name="FLAKE8" time="0.046" /><testcase classname="src.sherpa_streamlit.__init__" name="FLAKE8" time="0.034" /><testcase classname="src.sherpa_streamlit.sherpa" name="FLAKE8" time="1.321"><error message="failed on setup with "_pytest.nodes.Collector.CollectError: ImportError while importing test module '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: ../../../.pyenv/versions/3.8.2/lib/python3.8/importlib/__init__.py:127: in import_module return _bootstrap._gcd_import(name[level:], package, level) src/sherpa_streamlit/__init__.py:4: in <module> from .visualizer import visualize src/sherpa_streamlit/visualizer.py:11: in <module> from streamlit.uploaded_file_manager import UploadedFile E ModuleNotFoundError: No module named 'streamlit.uploaded_file_manager'"">self = <Package sherpa_streamlit>
def _importtestmodule(self):
# We assume we are only called once per module.
importmode = self.config.getoption("--import-mode")
try:
> mod = import_path(self.path, mode=importmode, root=self.config.rootpath)
.tox/report/lib/python3.8/site-packages/_pytest/python.py:618:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
p = PosixPath('/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py')
def import_path(
p: Union[str, "os.PathLike[str]"],
*,
mode: Union[str, ImportMode] = ImportMode.prepend,
root: Path,
) -> ModuleType:
"""Import and return a module from the given path, which can be a file (a module) or
a directory (a package).
The import mechanism used is controlled by the `mode` parameter:
* `mode == ImportMode.prepend`: the directory containing the module (or package, taking
`__init__.py` files into account) will be put at the *start* of `sys.path` before
being imported with `__import__.
* `mode == ImportMode.append`: same as `prepend`, but the directory will be appended
to the end of `sys.path`, if not already in `sys.path`.
* `mode == ImportMode.importlib`: uses more fine control mechanisms provided by `importlib`
to import the module, which avoids having to use `__import__` and muck with `sys.path`
at all. It effectively allows having same-named test modules in different places.
:param root:
Used as an anchor when mode == ImportMode.importlib to obtain
a unique name for the module being imported so it can safely be stored
into ``sys.modules``.
:raises ImportPathMismatchError:
If after importing the given `path` and the module `__file__`
are different. Only raised in `prepend` and `append` modes.
"""
mode = ImportMode(mode)
path = Path(p)
if not path.exists():
raise ImportError(path)
if mode is ImportMode.importlib:
module_name = module_name_from_path(path, root)
for meta_importer in sys.meta_path:
spec = meta_importer.find_spec(module_name, [str(path.parent)])
if spec is not None:
break
else:
spec = importlib.util.spec_from_file_location(module_name, str(path))
if spec is None:
raise ImportError(f"Can't find module {module_name} at location {path}")
mod = importlib.util.module_from_spec(spec)
sys.modules[module_name] = mod
spec.loader.exec_module(mod) # type: ignore[union-attr]
insert_missing_modules(sys.modules, module_name)
return mod
pkg_path = resolve_package_path(path)
if pkg_path is not None:
pkg_root = pkg_path.parent
names = list(path.with_suffix("").relative_to(pkg_root).parts)
if names[-1] == "__init__":
names.pop()
module_name = ".".join(names)
else:
pkg_root = path.parent
module_name = path.stem
# Change sys.path permanently: restoring it at the end of this function would cause surprising
# problems because of delayed imports: for example, a conftest.py file imported by this function
# might have local imports, which would fail at runtime if we restored sys.path.
if mode is ImportMode.append:
if str(pkg_root) not in sys.path:
sys.path.append(str(pkg_root))
elif mode is ImportMode.prepend:
if str(pkg_root) != sys.path[0]:
sys.path.insert(0, str(pkg_root))
else:
assert_never(mode)
> importlib.import_module(module_name)
.tox/report/lib/python3.8/site-packages/_pytest/pathlib.py:533:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', package = None
def import_module(name, package=None):
"""Import a module.
The 'package' argument is required when performing a relative import. It
specifies the package to use as the anchor point from which to resolve the
relative import to an absolute import.
"""
level = 0
if name.startswith('.'):
if not package:
msg = ("the 'package' argument is required to perform a relative "
"import for {!r}")
raise TypeError(msg.format(name))
for character in name:
if character != '.':
break
level += 1
> return _bootstrap._gcd_import(name[level:], package, level)
../../../.pyenv/versions/3.8.2/lib/python3.8/importlib/__init__.py:127:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', package = None, level = 0
> ???
<frozen importlib._bootstrap>:1014:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', import_ = <function _gcd_import at 0x7f18dc5d1430>
> ???
<frozen importlib._bootstrap>:991:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', import_ = <function _gcd_import at 0x7f18dc5d1430>
> ???
<frozen importlib._bootstrap>:975:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
spec = ModuleSpec(name='sherpa_streamlit', loader=<_frozen_importlib_external.SourceFileLoader object at 0x7f18d2c0b7f0>, ori...reamlit/__init__.py', submodule_search_locations=['/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit'])
> ???
<frozen importlib._bootstrap>:671:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_frozen_importlib_external.SourceFileLoader object at 0x7f18d2c0b7f0>, module = <module 'sherpa_streamlit' from '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py'>
> ???
<frozen importlib._bootstrap_external>:783:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
f = <built-in function exec>
args = (<code object <module> at 0x7f18d8865660, file "/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__in...for Streamlit apps', '__file__': '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py', ...})
kwds = {}
> ???
<frozen importlib._bootstrap>:219:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
"Kairntech Sherpa building blocks for Streamlit apps"
__version__ = "0.4.4"
> from .visualizer import visualize
src/sherpa_streamlit/__init__.py:4:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
from typing import List, Optional, Iterable, cast
import pandas as pd
import plac
import streamlit as st
import streamlit.components.v1 as components
from annotated_text import annotation
from collections_extended import RangeMap
from sherpa_client.models import AnnotatedDocument
from sherpa_client.types import UNSET, File
> from streamlit.uploaded_file_manager import UploadedFile
E ModuleNotFoundError: No module named 'streamlit.uploaded_file_manager'
src/sherpa_streamlit/visualizer.py:11: ModuleNotFoundError
The above exception was the direct cause of the following exception:
self = <_HookCaller 'pytest_runtest_setup'>, args = (), kwargs = {'item': <Flake8Item sherpa.py>}, argname = 'item', firstresult = False
def __call__(self, *args, **kwargs):
if args:
raise TypeError("hook calling supports only keyword arguments")
assert not self.is_historic()
# This is written to avoid expensive operations when not needed.
if self.spec:
for argname in self.spec.argnames:
if argname not in kwargs:
notincall = tuple(set(self.spec.argnames) - kwargs.keys())
warnings.warn(
"Argument(s) {} which are declared in the hookspec "
"can not be found in this hook call".format(notincall),
stacklevel=2,
)
break
firstresult = self.spec.opts.get("firstresult")
else:
firstresult = False
> return self._hookexec(self.name, self.get_hookimpls(), kwargs, firstresult)
.tox/report/lib/python3.8/site-packages/pluggy/_hooks.py:265:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_pytest.config.PytestPluginManager object at 0x7f18d6cbb070>, hook_name = 'pytest_runtest_setup'
methods = [<HookImpl plugin_name='nose', plugin=<module '_pytest.nose' from '/home/olivier/dev/kairntech/sherpa_streamlit/.tox/r...=None>>, <HookImpl plugin_name='logging-plugin', plugin=<_pytest.logging.LoggingPlugin object at 0x7f18d8882ca0>>, ...]
kwargs = {'item': <Flake8Item sherpa.py>}, firstresult = False
def _hookexec(self, hook_name, methods, kwargs, firstresult):
# called from all hookcaller instances.
# enable_tracing will set its own wrapping function at self._inner_hookexec
> return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
.tox/report/lib/python3.8/site-packages/pluggy/_manager.py:80:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
item = <Flake8Item sherpa.py>
def pytest_runtest_setup(item: Item) -> None:
_update_current_test_var(item, "setup")
> item.session._setupstate.setup(item)
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:155:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_pytest.runner.SetupState object at 0x7f18d4e31a60>, item = <Flake8Item sherpa.py>
def setup(self, item: Item) -> None:
"""Setup objects along the collector chain to the item."""
needed_collectors = item.listchain()
# If a collector fails its setup, fail its entire subtree of items.
# The setup is not retried for each item - the same exception is used.
for col, (finalizers, exc) in self.stack.items():
assert col in needed_collectors, "previous item was not torn down properly"
if exc:
raise exc
for col in needed_collectors[len(self.stack) :]:
assert col not in self.stack
# Push onto the stack.
self.stack[col] = ([col.teardown], None)
try:
col.setup()
except TEST_OUTCOME as exc:
self.stack[col] = (self.stack[col][0], exc)
> raise exc
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:495:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_pytest.runner.SetupState object at 0x7f18d4e31a60>, item = <Flake8Item sherpa.py>
def setup(self, item: Item) -> None:
"""Setup objects along the collector chain to the item."""
needed_collectors = item.listchain()
# If a collector fails its setup, fail its entire subtree of items.
# The setup is not retried for each item - the same exception is used.
for col, (finalizers, exc) in self.stack.items():
assert col in needed_collectors, "previous item was not torn down properly"
if exc:
raise exc
for col in needed_collectors[len(self.stack) :]:
assert col not in self.stack
# Push onto the stack.
self.stack[col] = ([col.teardown], None)
try:
> col.setup()
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:492:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Package sherpa_streamlit>
def setup(self) -> None:
# Not using fixtures to call setup_module here because autouse fixtures
# from packages are not called automatically (#4085).
setup_module = _get_first_non_fixture_func(
> self.obj, ("setUpModule", "setup_module")
)
.tox/report/lib/python3.8/site-packages/_pytest/python.py:691:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Package sherpa_streamlit>
@property
def obj(self):
"""Underlying Python object."""
obj = getattr(self, "_obj", None)
if obj is None:
> self._obj = obj = self._getobj()
.tox/report/lib/python3.8/site-packages/_pytest/python.py:311:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Package sherpa_streamlit>
def _getobj(self):
> return self._importtestmodule()
.tox/report/lib/python3.8/site-packages/_pytest/python.py:529:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Package sherpa_streamlit>
def _importtestmodule(self):
# We assume we are only called once per module.
importmode = self.config.getoption("--import-mode")
try:
mod = import_path(self.path, mode=importmode, root=self.config.rootpath)
except SyntaxError as e:
raise self.CollectError(
ExceptionInfo.from_current().getrepr(style="short")
) from e
except ImportPathMismatchError as e:
raise self.CollectError(
"import file mismatch:\n"
"imported module %r has this __file__ attribute:\n"
" %s\n"
"which is not the same as the test file we want to collect:\n"
" %s\n"
"HINT: remove __pycache__ / .pyc files and/or use a "
"unique basename for your test file modules" % e.args
) from e
except ImportError as e:
exc_info = ExceptionInfo.from_current()
if self.config.getoption("verbose") < 2:
exc_info.traceback = exc_info.traceback.filter(filter_traceback)
exc_repr = (
exc_info.getrepr(style="short")
if exc_info.traceback
else exc_info.exconly()
)
formatted_tb = str(exc_repr)
> raise self.CollectError(
"ImportError while importing test module '{path}'.\n"
"Hint: make sure your test modules/packages have valid Python names.\n"
"Traceback:\n"
"{traceback}".format(path=self.path, traceback=formatted_tb)
) from e
E _pytest.nodes.Collector.CollectError: ImportError while importing test module '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py'.
E Hint: make sure your test modules/packages have valid Python names.
E Traceback:
E ../../../.pyenv/versions/3.8.2/lib/python3.8/importlib/__init__.py:127: in import_module
E return _bootstrap._gcd_import(name[level:], package, level)
E src/sherpa_streamlit/__init__.py:4: in <module>
E from .visualizer import visualize
E src/sherpa_streamlit/visualizer.py:11: in <module>
E from streamlit.uploaded_file_manager import UploadedFile
E E ModuleNotFoundError: No module named 'streamlit.uploaded_file_manager'
.tox/report/lib/python3.8/site-packages/_pytest/python.py:643: CollectError</error></testcase><testcase classname="src.sherpa_streamlit.util" name="FLAKE8" time="0.000"><error message="failed on setup with "_pytest.nodes.Collector.CollectError: ImportError while importing test module '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: ../../../.pyenv/versions/3.8.2/lib/python3.8/importlib/__init__.py:127: in import_module return _bootstrap._gcd_import(name[level:], package, level) src/sherpa_streamlit/__init__.py:4: in <module> from .visualizer import visualize src/sherpa_streamlit/visualizer.py:11: in <module> from streamlit.uploaded_file_manager import UploadedFile E ModuleNotFoundError: No module named 'streamlit.uploaded_file_manager'"">self = <Package sherpa_streamlit>
def _importtestmodule(self):
# We assume we are only called once per module.
importmode = self.config.getoption("--import-mode")
try:
> mod = import_path(self.path, mode=importmode, root=self.config.rootpath)
.tox/report/lib/python3.8/site-packages/_pytest/python.py:618:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
p = PosixPath('/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py')
def import_path(
p: Union[str, "os.PathLike[str]"],
*,
mode: Union[str, ImportMode] = ImportMode.prepend,
root: Path,
) -> ModuleType:
"""Import and return a module from the given path, which can be a file (a module) or
a directory (a package).
The import mechanism used is controlled by the `mode` parameter:
* `mode == ImportMode.prepend`: the directory containing the module (or package, taking
`__init__.py` files into account) will be put at the *start* of `sys.path` before
being imported with `__import__.
* `mode == ImportMode.append`: same as `prepend`, but the directory will be appended
to the end of `sys.path`, if not already in `sys.path`.
* `mode == ImportMode.importlib`: uses more fine control mechanisms provided by `importlib`
to import the module, which avoids having to use `__import__` and muck with `sys.path`
at all. It effectively allows having same-named test modules in different places.
:param root:
Used as an anchor when mode == ImportMode.importlib to obtain
a unique name for the module being imported so it can safely be stored
into ``sys.modules``.
:raises ImportPathMismatchError:
If after importing the given `path` and the module `__file__`
are different. Only raised in `prepend` and `append` modes.
"""
mode = ImportMode(mode)
path = Path(p)
if not path.exists():
raise ImportError(path)
if mode is ImportMode.importlib:
module_name = module_name_from_path(path, root)
for meta_importer in sys.meta_path:
spec = meta_importer.find_spec(module_name, [str(path.parent)])
if spec is not None:
break
else:
spec = importlib.util.spec_from_file_location(module_name, str(path))
if spec is None:
raise ImportError(f"Can't find module {module_name} at location {path}")
mod = importlib.util.module_from_spec(spec)
sys.modules[module_name] = mod
spec.loader.exec_module(mod) # type: ignore[union-attr]
insert_missing_modules(sys.modules, module_name)
return mod
pkg_path = resolve_package_path(path)
if pkg_path is not None:
pkg_root = pkg_path.parent
names = list(path.with_suffix("").relative_to(pkg_root).parts)
if names[-1] == "__init__":
names.pop()
module_name = ".".join(names)
else:
pkg_root = path.parent
module_name = path.stem
# Change sys.path permanently: restoring it at the end of this function would cause surprising
# problems because of delayed imports: for example, a conftest.py file imported by this function
# might have local imports, which would fail at runtime if we restored sys.path.
if mode is ImportMode.append:
if str(pkg_root) not in sys.path:
sys.path.append(str(pkg_root))
elif mode is ImportMode.prepend:
if str(pkg_root) != sys.path[0]:
sys.path.insert(0, str(pkg_root))
else:
assert_never(mode)
> importlib.import_module(module_name)
.tox/report/lib/python3.8/site-packages/_pytest/pathlib.py:533:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', package = None
def import_module(name, package=None):
"""Import a module.
The 'package' argument is required when performing a relative import. It
specifies the package to use as the anchor point from which to resolve the
relative import to an absolute import.
"""
level = 0
if name.startswith('.'):
if not package:
msg = ("the 'package' argument is required to perform a relative "
"import for {!r}")
raise TypeError(msg.format(name))
for character in name:
if character != '.':
break
level += 1
> return _bootstrap._gcd_import(name[level:], package, level)
../../../.pyenv/versions/3.8.2/lib/python3.8/importlib/__init__.py:127:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', package = None, level = 0
> ???
<frozen importlib._bootstrap>:1014:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', import_ = <function _gcd_import at 0x7f18dc5d1430>
> ???
<frozen importlib._bootstrap>:991:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', import_ = <function _gcd_import at 0x7f18dc5d1430>
> ???
<frozen importlib._bootstrap>:975:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
spec = ModuleSpec(name='sherpa_streamlit', loader=<_frozen_importlib_external.SourceFileLoader object at 0x7f18d2c0b7f0>, ori...reamlit/__init__.py', submodule_search_locations=['/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit'])
> ???
<frozen importlib._bootstrap>:671:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_frozen_importlib_external.SourceFileLoader object at 0x7f18d2c0b7f0>, module = <module 'sherpa_streamlit' from '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py'>
> ???
<frozen importlib._bootstrap_external>:783:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
f = <built-in function exec>
args = (<code object <module> at 0x7f18d8865660, file "/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__in...for Streamlit apps', '__file__': '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py', ...})
kwds = {}
> ???
<frozen importlib._bootstrap>:219:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
"Kairntech Sherpa building blocks for Streamlit apps"
__version__ = "0.4.4"
> from .visualizer import visualize
src/sherpa_streamlit/__init__.py:4:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
from typing import List, Optional, Iterable, cast
import pandas as pd
import plac
import streamlit as st
import streamlit.components.v1 as components
from annotated_text import annotation
from collections_extended import RangeMap
from sherpa_client.models import AnnotatedDocument
from sherpa_client.types import UNSET, File
> from streamlit.uploaded_file_manager import UploadedFile
E ModuleNotFoundError: No module named 'streamlit.uploaded_file_manager'
src/sherpa_streamlit/visualizer.py:11: ModuleNotFoundError
The above exception was the direct cause of the following exception:
self = <_HookCaller 'pytest_runtest_setup'>, args = (), kwargs = {'item': <Flake8Item util.py>}, argname = 'item', firstresult = False
def __call__(self, *args, **kwargs):
if args:
raise TypeError("hook calling supports only keyword arguments")
assert not self.is_historic()
# This is written to avoid expensive operations when not needed.
if self.spec:
for argname in self.spec.argnames:
if argname not in kwargs:
notincall = tuple(set(self.spec.argnames) - kwargs.keys())
warnings.warn(
"Argument(s) {} which are declared in the hookspec "
"can not be found in this hook call".format(notincall),
stacklevel=2,
)
break
firstresult = self.spec.opts.get("firstresult")
else:
firstresult = False
> return self._hookexec(self.name, self.get_hookimpls(), kwargs, firstresult)
.tox/report/lib/python3.8/site-packages/pluggy/_hooks.py:265:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_pytest.config.PytestPluginManager object at 0x7f18d6cbb070>, hook_name = 'pytest_runtest_setup'
methods = [<HookImpl plugin_name='nose', plugin=<module '_pytest.nose' from '/home/olivier/dev/kairntech/sherpa_streamlit/.tox/r...=None>>, <HookImpl plugin_name='logging-plugin', plugin=<_pytest.logging.LoggingPlugin object at 0x7f18d8882ca0>>, ...]
kwargs = {'item': <Flake8Item util.py>}, firstresult = False
def _hookexec(self, hook_name, methods, kwargs, firstresult):
# called from all hookcaller instances.
# enable_tracing will set its own wrapping function at self._inner_hookexec
> return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
.tox/report/lib/python3.8/site-packages/pluggy/_manager.py:80:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
item = <Flake8Item util.py>
def pytest_runtest_setup(item: Item) -> None:
_update_current_test_var(item, "setup")
> item.session._setupstate.setup(item)
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:155:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_pytest.runner.SetupState object at 0x7f18d4e31a60>, item = <Flake8Item util.py>
def setup(self, item: Item) -> None:
"""Setup objects along the collector chain to the item."""
needed_collectors = item.listchain()
# If a collector fails its setup, fail its entire subtree of items.
# The setup is not retried for each item - the same exception is used.
for col, (finalizers, exc) in self.stack.items():
assert col in needed_collectors, "previous item was not torn down properly"
if exc:
> raise exc
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:485:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
cls = <class '_pytest.runner.CallInfo'>, func = <function call_runtest_hook.<locals>.<lambda> at 0x7f18d2a57790>, when = 'setup', reraise = (<class '_pytest.outcomes.Exit'>, <class 'KeyboardInterrupt'>)
@classmethod
def from_call(
cls,
func: "Callable[[], TResult]",
when: "Literal['collect', 'setup', 'call', 'teardown']",
reraise: Optional[
Union[Type[BaseException], Tuple[Type[BaseException], ...]]
] = None,
) -> "CallInfo[TResult]":
"""Call func, wrapping the result in a CallInfo.
:param func:
The function to call. Called without arguments.
:param when:
The phase in which the function is called.
:param reraise:
Exception or exceptions that shall propagate if raised by the
function, instead of being wrapped in the CallInfo.
"""
excinfo = None
start = timing.time()
precise_start = timing.perf_counter()
try:
> result: Optional[TResult] = func()
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:339:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> lambda: ihook(item=item, **kwds), when=when, reraise=reraise
)
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:260:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_HookCaller 'pytest_runtest_setup'>, args = (), kwargs = {'item': <Flake8Item sherpa.py>}, argname = 'item', firstresult = False
def __call__(self, *args, **kwargs):
if args:
raise TypeError("hook calling supports only keyword arguments")
assert not self.is_historic()
# This is written to avoid expensive operations when not needed.
if self.spec:
for argname in self.spec.argnames:
if argname not in kwargs:
notincall = tuple(set(self.spec.argnames) - kwargs.keys())
warnings.warn(
"Argument(s) {} which are declared in the hookspec "
"can not be found in this hook call".format(notincall),
stacklevel=2,
)
break
firstresult = self.spec.opts.get("firstresult")
else:
firstresult = False
> return self._hookexec(self.name, self.get_hookimpls(), kwargs, firstresult)
.tox/report/lib/python3.8/site-packages/pluggy/_hooks.py:265:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_pytest.config.PytestPluginManager object at 0x7f18d6cbb070>, hook_name = 'pytest_runtest_setup'
methods = [<HookImpl plugin_name='nose', plugin=<module '_pytest.nose' from '/home/olivier/dev/kairntech/sherpa_streamlit/.tox/r...=None>>, <HookImpl plugin_name='logging-plugin', plugin=<_pytest.logging.LoggingPlugin object at 0x7f18d8882ca0>>, ...]
kwargs = {'item': <Flake8Item sherpa.py>}, firstresult = False
def _hookexec(self, hook_name, methods, kwargs, firstresult):
# called from all hookcaller instances.
# enable_tracing will set its own wrapping function at self._inner_hookexec
> return self._inner_hookexec(hook_name, methods, kwargs, firstresult)
.tox/report/lib/python3.8/site-packages/pluggy/_manager.py:80:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
item = <Flake8Item sherpa.py>
def pytest_runtest_setup(item: Item) -> None:
_update_current_test_var(item, "setup")
> item.session._setupstate.setup(item)
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:155:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_pytest.runner.SetupState object at 0x7f18d4e31a60>, item = <Flake8Item sherpa.py>
def setup(self, item: Item) -> None:
"""Setup objects along the collector chain to the item."""
needed_collectors = item.listchain()
# If a collector fails its setup, fail its entire subtree of items.
# The setup is not retried for each item - the same exception is used.
for col, (finalizers, exc) in self.stack.items():
assert col in needed_collectors, "previous item was not torn down properly"
if exc:
raise exc
for col in needed_collectors[len(self.stack) :]:
assert col not in self.stack
# Push onto the stack.
self.stack[col] = ([col.teardown], None)
try:
col.setup()
except TEST_OUTCOME as exc:
self.stack[col] = (self.stack[col][0], exc)
> raise exc
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:495:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_pytest.runner.SetupState object at 0x7f18d4e31a60>, item = <Flake8Item sherpa.py>
def setup(self, item: Item) -> None:
"""Setup objects along the collector chain to the item."""
needed_collectors = item.listchain()
# If a collector fails its setup, fail its entire subtree of items.
# The setup is not retried for each item - the same exception is used.
for col, (finalizers, exc) in self.stack.items():
assert col in needed_collectors, "previous item was not torn down properly"
if exc:
raise exc
for col in needed_collectors[len(self.stack) :]:
assert col not in self.stack
# Push onto the stack.
self.stack[col] = ([col.teardown], None)
try:
> col.setup()
.tox/report/lib/python3.8/site-packages/_pytest/runner.py:492:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Package sherpa_streamlit>
def setup(self) -> None:
# Not using fixtures to call setup_module here because autouse fixtures
# from packages are not called automatically (#4085).
setup_module = _get_first_non_fixture_func(
> self.obj, ("setUpModule", "setup_module")
)
.tox/report/lib/python3.8/site-packages/_pytest/python.py:691:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Package sherpa_streamlit>
@property
def obj(self):
"""Underlying Python object."""
obj = getattr(self, "_obj", None)
if obj is None:
> self._obj = obj = self._getobj()
.tox/report/lib/python3.8/site-packages/_pytest/python.py:311:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Package sherpa_streamlit>
def _getobj(self):
> return self._importtestmodule()
.tox/report/lib/python3.8/site-packages/_pytest/python.py:529:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <Package sherpa_streamlit>
def _importtestmodule(self):
# We assume we are only called once per module.
importmode = self.config.getoption("--import-mode")
try:
mod = import_path(self.path, mode=importmode, root=self.config.rootpath)
except SyntaxError as e:
raise self.CollectError(
ExceptionInfo.from_current().getrepr(style="short")
) from e
except ImportPathMismatchError as e:
raise self.CollectError(
"import file mismatch:\n"
"imported module %r has this __file__ attribute:\n"
" %s\n"
"which is not the same as the test file we want to collect:\n"
" %s\n"
"HINT: remove __pycache__ / .pyc files and/or use a "
"unique basename for your test file modules" % e.args
) from e
except ImportError as e:
exc_info = ExceptionInfo.from_current()
if self.config.getoption("verbose") < 2:
exc_info.traceback = exc_info.traceback.filter(filter_traceback)
exc_repr = (
exc_info.getrepr(style="short")
if exc_info.traceback
else exc_info.exconly()
)
formatted_tb = str(exc_repr)
> raise self.CollectError(
"ImportError while importing test module '{path}'.\n"
"Hint: make sure your test modules/packages have valid Python names.\n"
"Traceback:\n"
"{traceback}".format(path=self.path, traceback=formatted_tb)
) from e
E _pytest.nodes.Collector.CollectError: ImportError while importing test module '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py'.
E Hint: make sure your test modules/packages have valid Python names.
E Traceback:
E ../../../.pyenv/versions/3.8.2/lib/python3.8/importlib/__init__.py:127: in import_module
E return _bootstrap._gcd_import(name[level:], package, level)
E src/sherpa_streamlit/__init__.py:4: in <module>
E from .visualizer import visualize
E src/sherpa_streamlit/visualizer.py:11: in <module>
E from streamlit.uploaded_file_manager import UploadedFile
E E ModuleNotFoundError: No module named 'streamlit.uploaded_file_manager'
.tox/report/lib/python3.8/site-packages/_pytest/python.py:643: CollectError</error></testcase><testcase classname="src.sherpa_streamlit.visualizer" name="FLAKE8" time="0.000"><error message="failed on setup with "_pytest.nodes.Collector.CollectError: ImportError while importing test module '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py'. Hint: make sure your test modules/packages have valid Python names. Traceback: ../../../.pyenv/versions/3.8.2/lib/python3.8/importlib/__init__.py:127: in import_module return _bootstrap._gcd_import(name[level:], package, level) src/sherpa_streamlit/__init__.py:4: in <module> from .visualizer import visualize src/sherpa_streamlit/visualizer.py:11: in <module> from streamlit.uploaded_file_manager import UploadedFile E ModuleNotFoundError: No module named 'streamlit.uploaded_file_manager'"">self = <Package sherpa_streamlit>
def _importtestmodule(self):
# We assume we are only called once per module.
importmode = self.config.getoption("--import-mode")
try:
> mod = import_path(self.path, mode=importmode, root=self.config.rootpath)
.tox/report/lib/python3.8/site-packages/_pytest/python.py:618:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
p = PosixPath('/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py')
def import_path(
p: Union[str, "os.PathLike[str]"],
*,
mode: Union[str, ImportMode] = ImportMode.prepend,
root: Path,
) -> ModuleType:
"""Import and return a module from the given path, which can be a file (a module) or
a directory (a package).
The import mechanism used is controlled by the `mode` parameter:
* `mode == ImportMode.prepend`: the directory containing the module (or package, taking
`__init__.py` files into account) will be put at the *start* of `sys.path` before
being imported with `__import__.
* `mode == ImportMode.append`: same as `prepend`, but the directory will be appended
to the end of `sys.path`, if not already in `sys.path`.
* `mode == ImportMode.importlib`: uses more fine control mechanisms provided by `importlib`
to import the module, which avoids having to use `__import__` and muck with `sys.path`
at all. It effectively allows having same-named test modules in different places.
:param root:
Used as an anchor when mode == ImportMode.importlib to obtain
a unique name for the module being imported so it can safely be stored
into ``sys.modules``.
:raises ImportPathMismatchError:
If after importing the given `path` and the module `__file__`
are different. Only raised in `prepend` and `append` modes.
"""
mode = ImportMode(mode)
path = Path(p)
if not path.exists():
raise ImportError(path)
if mode is ImportMode.importlib:
module_name = module_name_from_path(path, root)
for meta_importer in sys.meta_path:
spec = meta_importer.find_spec(module_name, [str(path.parent)])
if spec is not None:
break
else:
spec = importlib.util.spec_from_file_location(module_name, str(path))
if spec is None:
raise ImportError(f"Can't find module {module_name} at location {path}")
mod = importlib.util.module_from_spec(spec)
sys.modules[module_name] = mod
spec.loader.exec_module(mod) # type: ignore[union-attr]
insert_missing_modules(sys.modules, module_name)
return mod
pkg_path = resolve_package_path(path)
if pkg_path is not None:
pkg_root = pkg_path.parent
names = list(path.with_suffix("").relative_to(pkg_root).parts)
if names[-1] == "__init__":
names.pop()
module_name = ".".join(names)
else:
pkg_root = path.parent
module_name = path.stem
# Change sys.path permanently: restoring it at the end of this function would cause surprising
# problems because of delayed imports: for example, a conftest.py file imported by this function
# might have local imports, which would fail at runtime if we restored sys.path.
if mode is ImportMode.append:
if str(pkg_root) not in sys.path:
sys.path.append(str(pkg_root))
elif mode is ImportMode.prepend:
if str(pkg_root) != sys.path[0]:
sys.path.insert(0, str(pkg_root))
else:
assert_never(mode)
> importlib.import_module(module_name)
.tox/report/lib/python3.8/site-packages/_pytest/pathlib.py:533:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', package = None
def import_module(name, package=None):
"""Import a module.
The 'package' argument is required when performing a relative import. It
specifies the package to use as the anchor point from which to resolve the
relative import to an absolute import.
"""
level = 0
if name.startswith('.'):
if not package:
msg = ("the 'package' argument is required to perform a relative "
"import for {!r}")
raise TypeError(msg.format(name))
for character in name:
if character != '.':
break
level += 1
> return _bootstrap._gcd_import(name[level:], package, level)
../../../.pyenv/versions/3.8.2/lib/python3.8/importlib/__init__.py:127:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', package = None, level = 0
> ???
<frozen importlib._bootstrap>:1014:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', import_ = <function _gcd_import at 0x7f18dc5d1430>
> ???
<frozen importlib._bootstrap>:991:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
name = 'sherpa_streamlit', import_ = <function _gcd_import at 0x7f18dc5d1430>
> ???
<frozen importlib._bootstrap>:975:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
spec = ModuleSpec(name='sherpa_streamlit', loader=<_frozen_importlib_external.SourceFileLoader object at 0x7f18d2c0b7f0>, ori...reamlit/__init__.py', submodule_search_locations=['/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit'])
> ???
<frozen importlib._bootstrap>:671:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
self = <_frozen_importlib_external.SourceFileLoader object at 0x7f18d2c0b7f0>, module = <module 'sherpa_streamlit' from '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py'>
> ???
<frozen importlib._bootstrap_external>:783:
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
f = <built-in function exec>
args = (<code object <module> at 0x7f18d8865660, file "/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__in...for Streamlit apps', '__file__': '/home/olivier/dev/kairntech/sherpa_streamlit/src/sherpa_streamlit/__init__.py', ...})
kwds = {}