The list of package version requirements is available in setup.py
, and will be automatically installed along PyDESeq2 when using PyPI. For reference, the code was tested with python 3.8 and the following package versions:
- numpy==1.23.0
- pandas==1.4.3
- scikit-learn==1.1.1
- scipy==1.8.1
- statsmodels==0.13.2
Please don't hesitate to open an issue in case you encounter any problems due to possible deprecations.