compile failed

[yejunbin]

compiling using:

make CC=gcc-11 CPP=g++-11 CXX=g++-11 LD=g++-1

failed to create biogpt. only create file main

log info:

I biogpt.cpp build info:
I UNAME_S: Linux
I UNAME_P: x86_64
I UNAME_M: x86_64
I CFLAGS: -I. -O3 -std=c11 -fPIC -Wall -Wextra -Wpedantic -Wcast-qual -Wdouble-promotion -Wshadow -Wstrict-prototypes -Wpointer-arith -pthread -march=native -mtune=native
I CXXFLAGS: -I. -O3 -std=c++11 -fPIC -Wall -Wextra -Wpedantic -Wcast-qual -Wno-unused-function -Wno-multichar -pthread -march=native -mtune=native
I LDFLAGS:
I CC:
I CXX:

gcc-11 -I. -O3 -std=c11 -fPIC -Wall -Wextra -Wpedantic -Wcast-qual -Wdouble-promotion -Wshadow -Wstrict-prototypes -Wpointer-arith -pthread -march=native -mtune=native -c ggml.c -o ggml.o
g++-11 -I. -O3 -std=c++11 -fPIC -Wall -Wextra -Wpedantic -Wcast-qual -Wno-unused-function -Wno-multichar -pthread -march=native -mtune=native -c mosestokenizer.cpp -o mosestokenizer.o
g++-11 -I. -O3 -std=c++11 -fPIC -Wall -Wextra -Wpedantic -Wcast-qual -Wno-unused-function -Wno-multichar -pthread -march=native -mtune=native -c bpe.cpp -o bpe.o
g++-11 -I. -O3 -std=c++11 -fPIC -Wall -Wextra -Wpedantic -Wcast-qual -Wno-unused-function -Wno-multichar -pthread -march=native -mtune=native -c biogpt.cpp -o biogpt.o
biogpt.cpp: In function ‘bool biogpt_model_load(const string&, biogpt_model&, biogpt_vocab&, uint8_t)’:
biogpt.cpp:210:13: warning: C++ designated initializers only available with ‘-std=c++20’ or ‘-std=gnu++20’ [-Wpedantic]
210 | .mem_size = ctx_size,
| ^
biogpt.cpp:211:13: warning: C++ designated initializers only available with ‘-std=c++20’ or ‘-std=gnu++20’ [-Wpedantic]
211 | .mem_buffer = NULL,
| ^
biogpt.cpp:212:13: warning: C++ designated initializers only available with ‘-std=c++20’ or ‘-std=gnu++20’ [-Wpedantic]
212 | .no_alloc = false,
| ^
biogpt.cpp:364:89: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 5 has type ‘int64_t’ {aka ‘long int’} [-Wformat=]
364 | fprintf(stderr, "%s: tensor '%s' has wrong shape in model file: got [%lld, %lld], expected [%d, %d]\n",
| ~~~^
| |
| long long int
| %ld
365 | func, name.data(), tensor->ne[0], tensor->ne[1], ne[0], ne[1]);
| ~~~~~~~~~~~~~
| |
| int64_t {aka long int}
biogpt.cpp:364:95: warning: format ‘%lld’ expects argument of type ‘long long int’, but argument 6 has type ‘int64_t’ {aka ‘long int’} [-Wformat=]
364 | fprintf(stderr, "%s: tensor '%s' has wrong shape in model file: got [%lld, %lld], expected [%d, %d]\n",
| ~~~^
| |
| long long int
| %ld
365 | func, name.data(), tensor->ne[0], tensor->ne[1], ne[0], ne[1]);
| ~~~~~~~~~~~~~
| |
| int64_t {aka long int}
biogpt.cpp: In function ‘bool biogpt_eval(const biogpt_model&, int, int, const std::vector&, std::vector&, size_t&)’:
biogpt.cpp:596:9: warning: C++ designated initializers only available with ‘-std=c++20’ or ‘-std=gnu++20’ [-Wpedantic]
596 | .mem_size = buf_size,
| ^
biogpt.cpp:597:9: warning: C++ designated initializers only available with ‘-std=c++20’ or ‘-std=gnu++20’ [-Wpedantic]
597 | .mem_buffer = buf,
| ^
biogpt.cpp:598:9: warning: C++ designated initializers only available with ‘-std=c++20’ or ‘-std=gnu++20’ [-Wpedantic]
598 | .no_alloc = false,
| ^
g++-11 -I. -O3 -std=c++11 -fPIC -Wall -Wextra -Wpedantic -Wcast-qual -Wno-unused-function -Wno-multichar -pthread -march=native -mtune=native -c main.cpp -o main.o
g++-11 -I. -O3 -std=c++11 -fPIC -Wall -Wextra -Wpedantic -Wcast-qual -Wno-unused-function -Wno-multichar -pthread -march=native -mtune=native main.o biogpt.o mosestokenizer.o bpe.o ggml.o -o main

[PABannier]

Hi @yejunbin , thanks for reaching out about this issue!

The instructions were not clear actually. I just merged a PR to fix compile warnings and make the instructions more clear.

Could you run a make clean then make again?
You should see a main executable. This is actually the executable you want to run, not biogpt.
Also make sure to download the required files at this address (see the instructions in README) and to convert the weights to ggml format.

After that, ./main -p "trastuzumab" should work.

[PABannier]

Closing as #20 should fix this.