/
reader.go
328 lines (308 loc) · 8.27 KB
/
reader.go
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
package index
import (
"bytes"
"context"
"io"
"strings"
"github.com/gogo/protobuf/proto"
"github.com/pachyderm/pachyderm/src/client/pkg/grpcutil"
"github.com/pachyderm/pachyderm/src/server/pkg/obj"
"github.com/pachyderm/pachyderm/src/server/pkg/storage/chunk"
"github.com/pachyderm/pachyderm/src/server/pkg/storage/fileset/tar"
"modernc.org/mathutil"
)
type levelReader struct {
cr *chunk.Reader
tr *tar.Reader
currHdr, peekHdr *Header
}
type pathFilter struct {
pathRange *PathRange
prefix string
}
// Reader is used for reading a multi-level index.
type Reader struct {
ctx context.Context
objC obj.Client
chunks *chunk.Storage
path string
filter *pathFilter
levels []*levelReader
done bool
}
// NewReader create a new Reader.
func NewReader(ctx context.Context, objC obj.Client, chunks *chunk.Storage, path string, opts ...Option) *Reader {
r := &Reader{
ctx: ctx,
objC: objC,
chunks: chunks,
path: path,
}
for _, opt := range opts {
opt(r)
}
return r
}
// Next gets the next header in the index.
func (r *Reader) Next() (*Header, error) {
if err := r.setupLevels(); err != nil {
return nil, err
}
if r.levels[0].peekHdr != nil {
hdr := r.levels[0].peekHdr
r.levels[0].peekHdr = nil
return hdr, nil
}
if r.done {
return nil, io.EOF
}
return r.next(len(r.levels) - 1)
}
func (r *Reader) setupLevels() error {
if r.levels != nil {
return nil
}
// Setup top level.
objR, err := r.objC.Reader(r.ctx, r.path, 0, 0)
if err != nil {
return err
}
buf := &bytes.Buffer{}
if _, err := io.Copy(buf, objR); err != nil {
return err
}
if err := objR.Close(); err != nil {
return err
}
r.levels = []*levelReader{&levelReader{tr: tar.NewReader(buf)}}
// Traverse until we reach the first entry in the lowest level.
for {
hdr, err := r.peek(len(r.levels) - 1)
if err != nil {
return err
}
// Return when we are at the lowest level.
if hdr.Hdr.Typeflag == indexType {
return nil
}
_, err = r.next(len(r.levels) - 1)
if err != nil {
return err
}
// Setup next level.
// (bryce) this whole process of reading at the offset is janky, needs to be re-thought.
cr := r.chunks.NewReader(r.ctx, r.callback(len(r.levels)))
dataRef := hdr.Idx.DataOp.DataRefs[0]
dataRef.OffsetBytes = hdr.Idx.Range.Offset
dataRef.SizeBytes -= hdr.Idx.Range.Offset
cr.NextRange([]*chunk.DataRef{dataRef})
r.levels = append(r.levels, &levelReader{
cr: cr,
tr: tar.NewReader(cr),
})
}
}
func (r *Reader) peek(level int) (*Header, error) {
l := r.levels[level]
if l.peekHdr != nil {
return l.peekHdr, nil
}
var err error
l.peekHdr, err = r.next(level)
return l.peekHdr, err
}
func (r *Reader) next(level int) (*Header, error) {
l := r.levels[level]
if l.peekHdr != nil {
hdr := l.peekHdr
l.peekHdr = nil
return hdr, nil
}
for {
hdr, err := l.tr.Next()
if err != nil {
return nil, err
}
// Return if done.
if r.atEnd(hdr.Name) {
r.done = true
return nil, io.EOF
}
// Handle lowest level index.
if hdr.Typeflag == indexType {
// Skip to the starting header.
if !r.atStart(hdr.Name) {
continue
}
return deserialize(l.tr, hdr)
}
// Handle index level above lowest.
fullHdr, err := deserialize(l.tr, hdr)
if err != nil {
return nil, err
}
// Skip to the starting header.
if !r.atStart(fullHdr.Idx.Range.LastPath) {
continue
}
return fullHdr, nil
}
}
// atStart returns true when the name is in the valid range for a filter (always true if no filter is set).
// For a range filter, this means the name is >= to the lower bound.
// For a prefix filter, this means the name is >= to the prefix.
func (r *Reader) atStart(name string) bool {
if r.filter == nil {
return true
}
if r.filter.pathRange != nil {
return name >= r.filter.pathRange.Lower
}
return name >= r.filter.prefix
}
// atEnd returns true when the name is past the valid range for a filter (always false if no filter is set).
// For a range filter, this means the name is > than the upper bound.
// For a prefix filter, this means the name does not have the prefix and a name with the prefix cannot show up after it.
func (r *Reader) atEnd(name string) bool {
if r.filter == nil {
return false
}
if r.filter.pathRange != nil {
return name > r.filter.pathRange.Upper
}
// Name is past a prefix when the first len(prefix) bytes are greater than the prefix
// (use len(name) bytes for comparison when len(name) < len(prefix)).
// A simple greater than check would not suffice here for the prefix filter functionality
// (for example, if the index consisted of the paths "a", "ab", "abc", and "b", then a
// reader with the prefix filter set to "a" would end at the "ab" path rather than the "b" path).
cmpSize := mathutil.Min(len(name), len(r.filter.prefix))
return name[:cmpSize] > r.filter.prefix[:cmpSize]
}
// Peek peeks ahead in the index.
func (r *Reader) Peek() (*Header, error) {
if err := r.setupLevels(); err != nil {
return nil, err
}
if r.levels[0].peekHdr != nil {
return r.levels[0].peekHdr, nil
}
var err error
r.levels[0].peekHdr, err = r.Next()
return r.levels[0].peekHdr, err
}
func (r *Reader) callback(level int) chunk.ReaderFunc {
return func() ([]*chunk.DataRef, error) {
hdr, err := r.next(level - 1)
if err != nil {
return nil, err
}
r.levels[level-1].currHdr = hdr
return hdr.Idx.DataOp.DataRefs, nil
}
}
// Copy is the basic data structure to represent a copy of data from
// a reader to a writer.
type Copy struct {
level int
raw *chunk.Copy
hdrs []*Header
}
// ReadCopyFunc returns a function for copying data from the reader.
func (r *Reader) ReadCopyFunc(pathBound ...string) func() (*Copy, error) {
level := -1
var offset int64
var done bool
return func() (*Copy, error) {
if done {
return nil, io.EOF
}
// Setup levels, initialize first level.
if err := r.setupLevels(); err != nil {
return nil, err
}
if level < 0 {
level = len(r.levels) - 1
}
c := &Copy{level: r.wLevel(level)}
cr := r.levels[level].cr
// Handle index entries that span multiple chunks.
if offset > 0 {
raw, err := cr.ReadCopy(offset)
if err != nil {
return nil, err
}
c.raw = raw
}
// (bryce) this is janky, but we need the current header when copying a level above.
if r.levels[level].currHdr != nil {
r.levels[level].peekHdr, r.levels[level].currHdr = r.levels[level].currHdr, nil
}
// While not past a split point, get index entries to copy.
pastSplit := false
cr.OnSplit(func() { pastSplit = true })
for !pastSplit {
hdr, err := r.peek(level)
if err != nil {
if err == io.EOF {
done = true
return c, nil
}
return nil, err
}
// Stop copying when the last referenced (directly or indirectly) content
// chunk has a path that is >= the path bound.
if !BeforeBound(hdr.Idx.LastPathChunk, pathBound...) {
if hdr.Idx.Range == nil {
done = true
return c, nil
}
level++
offset = hdr.Idx.Range.Offset
return c, nil
}
c.hdrs = append(c.hdrs, hdr)
_, err = r.next(level)
if err != nil {
return nil, err
}
}
level--
return c, nil
}
}
// wLevel converts a reader level to the corresponding writer level.
// The reason this is necessary is because the corresponding writer level is the inverse of the reader level.
// The reader levels start at the top level index entry while the writer levels start at the content level.
func (r *Reader) wLevel(rLevel int) int {
return len(r.levels) - 1 - rLevel
}
// BeforeBound checks if the passed in string is before the string bound (exclusive).
// The string bound is optional, so if no string bound is passed then it returns true.
func BeforeBound(str string, strBound ...string) bool {
return len(strBound) == 0 || strings.Compare(str, strBound[0]) < 0
}
// Close closes the reader.
func (r *Reader) Close() error {
for i := 1; i < len(r.levels); i++ {
if err := r.levels[i].cr.Close(); err != nil {
return err
}
}
return nil
}
func deserialize(tr *tar.Reader, hdr *tar.Header) (*Header, error) {
data := &bytes.Buffer{}
buf := grpcutil.GetBuffer()
defer grpcutil.PutBuffer(buf)
if _, err := io.CopyBuffer(data, tr, buf); err != nil {
return nil, err
}
idx := &Index{}
if err := proto.Unmarshal(data.Bytes(), idx); err != nil {
return nil, err
}
return &Header{
Hdr: hdr,
Idx: idx,
}, nil
}