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worker.go
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worker.go
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package datum
import (
"bytes"
"context"
"encoding/hex"
"strings"
glob "github.com/pachyderm/ohmyglob"
"github.com/pachyderm/pachyderm/v2/src/internal/client"
"github.com/pachyderm/pachyderm/v2/src/internal/errors"
"github.com/pachyderm/pachyderm/v2/src/internal/grpcutil"
"github.com/pachyderm/pachyderm/v2/src/internal/pfsfile"
"github.com/pachyderm/pachyderm/v2/src/pfs"
"github.com/pachyderm/pachyderm/v2/src/server/worker/common"
"google.golang.org/protobuf/encoding/protojson"
"google.golang.org/protobuf/types/known/anypb"
)
func IsTaskResult(output *anypb.Any) bool {
return output.MessageIs(&PFSTaskResult{}) ||
output.MessageIs(&CrossTaskResult{}) ||
output.MessageIs(&KeyTaskResult{}) ||
output.MessageIs(&MergeTaskResult{}) ||
output.MessageIs(&ComposeTaskResult{})
}
func TaskResultFileSets(output *anypb.Any) ([]string, error) {
switch {
case output.MessageIs(&PFSTaskResult{}):
taskResult, err := deserializePFSTaskResult(output)
if err != nil {
return nil, err
}
return []string{taskResult.FileSetId}, nil
case output.MessageIs(&CrossTaskResult{}):
taskResult, err := deserializeCrossTaskResult(output)
if err != nil {
return nil, err
}
return []string{taskResult.FileSetId}, nil
case output.MessageIs(&KeyTaskResult{}):
taskResult, err := deserializeKeyTaskResult(output)
if err != nil {
return nil, err
}
return []string{taskResult.FileSetId}, nil
case output.MessageIs(&MergeTaskResult{}):
taskResult, err := deserializeMergeTaskResult(output)
if err != nil {
return nil, err
}
return []string{taskResult.FileSetId}, nil
case output.MessageIs(&ComposeTaskResult{}):
taskResult, err := deserializeComposeTaskResult(output)
if err != nil {
return nil, err
}
return []string{taskResult.FileSetId}, nil
default:
return nil, errors.Errorf("unrecognized any type (%v) in datum worker", output.TypeUrl)
}
}
func IsTask(input *anypb.Any) bool {
return input.MessageIs(&PFSTask{}) ||
input.MessageIs(&CrossTask{}) ||
input.MessageIs(&KeyTask{}) ||
input.MessageIs(&MergeTask{}) ||
input.MessageIs(&ComposeTask{})
}
func ProcessTask(ctx context.Context, c pfs.APIClient, input *anypb.Any) (*anypb.Any, error) {
switch {
case input.MessageIs(&PFSTask{}):
task, err := deserializePFSTask(input)
if err != nil {
return nil, err
}
ctx = client.SetAuthToken(ctx, task.AuthToken)
return processPFSTask(ctx, c, task)
case input.MessageIs(&CrossTask{}):
task, err := deserializeCrossTask(input)
if err != nil {
return nil, err
}
ctx = client.SetAuthToken(ctx, task.AuthToken)
return processCrossTask(ctx, c, task)
case input.MessageIs(&KeyTask{}):
task, err := deserializeKeyTask(input)
if err != nil {
return nil, err
}
ctx = client.SetAuthToken(ctx, task.AuthToken)
return processKeyTask(ctx, c, task)
case input.MessageIs(&MergeTask{}):
task, err := deserializeMergeTask(input)
if err != nil {
return nil, err
}
ctx = client.SetAuthToken(ctx, task.AuthToken)
return processMergeTask(ctx, c, task)
case input.MessageIs(&ComposeTask{}):
task, err := deserializeComposeTask(input)
if err != nil {
return nil, err
}
ctx = client.SetAuthToken(ctx, task.AuthToken)
return processComposeTask(ctx, c, task)
default:
return nil, errors.Errorf("unrecognized any type (%v) in datum worker", input.TypeUrl)
}
}
func processPFSTask(ctx context.Context, c client.PfsAPIClient, task *PFSTask) (*anypb.Any, error) {
fileSetID, err := WithCreateFileSet(ctx, c, "pachyderm-datums-pfs", func(s *Set) error {
commit := client.NewCommit(task.Input.Project, task.Input.Repo, task.Input.Branch, task.Input.Commit)
client, err := c.GlobFile(
ctx,
&pfs.GlobFileRequest{
Commit: commit,
Pattern: task.Input.Glob,
PathRange: task.PathRange,
},
)
if err != nil {
return errors.EnsureStack(err)
}
index := task.BaseIndex
return grpcutil.ForEach[*pfs.FileInfo](client, func(fi *pfs.FileInfo) error {
g := glob.MustCompile(pfsfile.CleanPath(task.Input.Glob), '/')
// Remove the trailing slash to support glob replace on directory paths.
p := strings.TrimRight(fi.File.Path, "/")
joinOn := g.Replace(p, task.Input.JoinOn)
groupBy := g.Replace(p, task.Input.GroupBy)
meta := &Meta{
Inputs: []*common.Input{
{
FileInfo: fi,
JoinOn: joinOn,
OuterJoin: task.Input.OuterJoin,
GroupBy: groupBy,
Name: task.Input.Name,
Lazy: task.Input.Lazy,
Branch: task.Input.Branch,
EmptyFiles: task.Input.EmptyFiles,
S3: task.Input.S3,
},
},
Index: index,
}
index++
return s.UploadMeta(meta)
})
})
if err != nil {
return nil, err
}
return serializePFSTaskResult(&PFSTaskResult{FileSetId: fileSetID})
}
func processCrossTask(ctx context.Context, c pfs.APIClient, task *CrossTask) (*anypb.Any, error) {
index := task.BaseIndex
fileSetID, err := WithCreateFileSet(ctx, c, "pachyderm-datums-cross", func(s *Set) error {
var iterators []Iterator
for i, fileSetID := range task.FileSetIds {
if i == int(task.BaseFileSetIndex) {
iterators = append(iterators, NewFileSetIterator(ctx, c, fileSetID, task.BaseFileSetPathRange))
continue
}
iterators = append(iterators, NewFileSetIterator(ctx, c, fileSetID, nil))
}
return iterate(nil, iterators, func(meta *Meta) error {
meta.Index = index
index++
return s.UploadMeta(meta)
})
})
if err != nil {
return nil, err
}
return serializeCrossTaskResult(&CrossTaskResult{FileSetId: fileSetID})
}
func iterate(crossInputs []*common.Input, iterators []Iterator, cb func(*Meta) error) error {
if len(iterators) == 0 {
return cb(&Meta{Inputs: crossInputs})
}
// TODO: Might want to exit fast for the zero datums case.
err := iterators[0].Iterate(func(meta *Meta) error {
return iterate(append(crossInputs, meta.Inputs...), iterators[1:], cb)
})
return errors.EnsureStack(err)
}
func processKeyTask(ctx context.Context, c pfs.APIClient, task *KeyTask) (*anypb.Any, error) {
resp, err := client.WithCreateFileSetClient(ctx, c, func(mf client.ModifyFile) error {
fsi := NewFileSetIterator(ctx, c, task.FileSetId, task.PathRange)
keyHasher := pfs.NewHash()
marshaller := protojson.MarshalOptions{}
err := fsi.Iterate(func(meta *Meta) error {
for _, input := range meta.Inputs {
var rawKey string
switch task.Type {
case KeyTask_JOIN:
rawKey = input.JoinOn
case KeyTask_GROUP:
rawKey = input.GroupBy
default:
return errors.Errorf("unrecognized key task type (%v)", task.Type)
}
// hash input keys to ensure consistently-shaped filepaths
keyHasher.Reset()
keyHasher.Write([]byte(rawKey))
key := hex.EncodeToString(keyHasher.Sum(nil))
out, err := marshaller.Marshal(input)
if err != nil {
return errors.Wrap(err, "marshalling input for key aggregation")
}
if err := mf.PutFile(key, bytes.NewReader(out), client.WithAppendPutFile()); err != nil {
return errors.EnsureStack(err)
}
}
return nil
})
return errors.EnsureStack(err)
})
if err != nil {
return nil, err
}
return serializeKeyTaskResult(&KeyTaskResult{FileSetId: resp.FileSetId})
}
func processMergeTask(ctx context.Context, c pfs.APIClient, task *MergeTask) (*anypb.Any, error) {
fileSetID, err := WithCreateFileSet(ctx, c, "pachyderm-datums-merge", func(s *Set) error {
var fsmis []Iterator
for _, fileSetId := range task.FileSetIds {
fsmis = append(fsmis, newFileSetMultiIterator(ctx, c, fileSetId, task.PathRange))
}
switch task.Type {
case MergeTask_JOIN:
return mergeByKey(fsmis, existingMetaHash, func(metas []*Meta) error {
var crossInputs [][]*common.Input
for _, m := range metas {
crossInputs = append(crossInputs, m.Inputs)
}
err := newCrossListIterator(crossInputs).Iterate(func(meta *Meta) error {
if len(meta.Inputs) == len(task.FileSetIds) {
// all inputs represented, include all inputs
return s.UploadMeta(meta)
}
var filtered []*common.Input
for _, in := range meta.Inputs {
if in.OuterJoin {
filtered = append(filtered, in)
}
}
if len(filtered) > 0 {
return s.UploadMeta(&Meta{Inputs: filtered})
}
return nil
})
return errors.EnsureStack(err)
})
case MergeTask_GROUP:
return mergeByKey(fsmis, existingMetaHash, func(metas []*Meta) error {
var allInputs []*common.Input
for _, m := range metas {
allInputs = append(allInputs, m.Inputs...)
}
return s.UploadMeta(&Meta{Inputs: allInputs})
})
default:
return errors.Errorf("unrecognized merge task type (%v)", task.Type)
}
})
if err != nil {
return nil, err
}
return serializeMergeTaskResult(&MergeTaskResult{FileSetId: fileSetID})
}
func existingMetaHash(meta *Meta) string {
return meta.Hash
}
func processComposeTask(ctx context.Context, c pfs.APIClient, task *ComposeTask) (*anypb.Any, error) {
resp, err := c.ComposeFileSet(
ctx,
&pfs.ComposeFileSetRequest{
FileSetIds: task.FileSetIds,
TtlSeconds: int64(common.TTL),
Compact: true,
},
)
if err != nil {
return nil, errors.EnsureStack(err)
}
return serializeComposeTaskResult(&ComposeTaskResult{FileSetId: resp.FileSetId})
}
func deserializePFSTask(taskAny *anypb.Any) (*PFSTask, error) {
task := &PFSTask{}
if err := taskAny.UnmarshalTo(task); err != nil {
return nil, errors.EnsureStack(err)
}
return task, nil
}
func serializePFSTaskResult(task *PFSTaskResult) (*anypb.Any, error) { return anypb.New(task) }
func deserializeCrossTask(taskAny *anypb.Any) (*CrossTask, error) {
task := &CrossTask{}
if err := taskAny.UnmarshalTo(task); err != nil {
return nil, errors.EnsureStack(err)
}
return task, nil
}
func serializeCrossTaskResult(task *CrossTaskResult) (*anypb.Any, error) { return anypb.New(task) }
func deserializeKeyTask(taskAny *anypb.Any) (*KeyTask, error) {
task := &KeyTask{}
if err := taskAny.UnmarshalTo(task); err != nil {
return nil, errors.EnsureStack(err)
}
return task, nil
}
func serializeKeyTaskResult(task *KeyTaskResult) (*anypb.Any, error) { return anypb.New(task) }
func deserializeMergeTask(taskAny *anypb.Any) (*MergeTask, error) {
task := &MergeTask{}
if err := taskAny.UnmarshalTo(task); err != nil {
return nil, errors.EnsureStack(err)
}
return task, nil
}
func serializeMergeTaskResult(task *MergeTaskResult) (*anypb.Any, error) { return anypb.New(task) }
func deserializeComposeTask(taskAny *anypb.Any) (*ComposeTask, error) {
task := &ComposeTask{}
if err := taskAny.UnmarshalTo(task); err != nil {
return nil, errors.EnsureStack(err)
}
return task, nil
}
func serializeComposeTaskResult(task *ComposeTaskResult) (*anypb.Any, error) { return anypb.New(task) }