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@PejLab

PejLab

Pejman Mohammadi's lab at The Scripps Research Institute

Popular repositories

  1. Tests Allelic Expression data for extreme imbalance w.r.t. population

    R 7 9

  2. ANEVA Public

    ANalysis of Expression VAriance

    MATLAB 3 1

  3. bln Public

    An R implementation of the Binomial-Logit-Normal distribution

    R 1

  4. vgdat Public

    Utilities and starter code to match Ensembl IDs with population variance estimates from GTEx v7.

    R

  5. SynNet Public

    Forked from cbg-ethz/SynNet

    Toolbox for design and optimization of miRNA-based synthetic classifier pathways

    MATLAB

  6. Pejtools Public

    Forked from pejminister/Pejtools

    These are a bunch of codes that makes daily data science/bioinformatics tasks easier in Matlab. No rocket science

    MATLAB 1

Repositories

  • aFC-n Public

    Calculate aFCs using least squares optimization (levenberg-marquardt) for a set of eqtls

    Cython 0 0 0 0 Updated Oct 14, 2021
  • ANEVA-DOT Public

    Tests Allelic Expression data for extreme imbalance w.r.t. population

    R 7 Apache-2.0 9 2 2 Updated Oct 8, 2021
  • ANEVA-DOT_reference_datasets Public

    ANEVA-DOT reference datasets

    Jupyter Notebook 0 2 0 0 Updated Nov 17, 2020
  • Datasets Public

    Our old repo for storing our datasets

    0 0 0 0 Updated Oct 17, 2020
  • bln Public

    An R implementation of the Binomial-Logit-Normal distribution

    R 0 Apache-2.0 1 0 0 Updated Jun 15, 2020
  • ANEVA Public

    ANalysis of Expression VAriance

    MATLAB 3 Apache-2.0 1 1 0 Updated May 28, 2020
  • gtex-pipeline Public

    GTEx & TOPMed data production and analysis pipelines

    Python 0 BSD-3-Clause 142 0 0 Updated Mar 27, 2020
  • jupyter-slack-notify Public

    A magic command for notifications via slack

    Python 0 MIT 13 0 0 Updated Dec 11, 2019
  • vgdat Public

    Utilities and starter code to match Ensembl IDs with population variance estimates from GTEx v7.

    R 0 0 0 0 Updated May 10, 2019
  • phaser Public

    phasing and Allele Specific Expression from RNA-seq

    Python 0 GPL-3.0 28 0 0 Updated Mar 23, 2019

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