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index.Rmd
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index.Rmd
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---
title: "propeller: finding statistically significant differences in cell type populations in single cell data"
site: workflowr::wflow_site
output:
workflowr::wflow_html:
toc: false
editor_options:
chunk_output_type: inline
---
The website hosts the analysis and evaluation of different statistical methods for
determining differences in cell type proportions in single cell RNA-seq data.
Citation:
Phipson, B, et al., Oshlack, A (2021). propeller: testing for differences in
cell type proportions in single cell data. bioRxiv.
* [Data exploration in healthy human PBMCs](pbmcJP.html)
* Simulation studies
+ [Null simulations](nullsims.html)
+ [Simulations with true differences]()
+ [Extreme case: 2 vs 20 cell types]()
+ [Extreme case: varying numbers of cells]()
* Analysis of real datasets
+ [Young and old female and male PBMCs]()
+ [Healthy human heart biopsies across development]()
+ [bronchoalveolar lavage fluid across healthy controls, moderate and severe COVID-19)]()