- GET /trials
- GET /studies
- GET /locations
- GET /germplasm
- GET /observationunits
- GET /events
- GET /samples
- GET /variables
MIAPPE ID |
MIAPPE Field |
BrAPI Entity |
BrAPI Field | Notes |
|---|---|---|---|---|
| DM-1 | Investigation | Trial | -- | |
| DM-2 | Investigation unique ID | Trial | trial .trialDbId | |
| DM-3 | Investigation title | Trial | trial .trialName | |
| DM-4 | Investigation description | Trial | trial .trialDescription | |
| DM-5 | Submission date | Trial | trial .datasetAuthorships[] .submissionDate | |
| DM-6 | Public release date | Trial | trial .datasetAuthorships[] .publicReleaseDate | |
| DM-7 | License | Trial | trial .datasetAuthorships[] .license | |
| DM-8 | MIAPPE version | -- | -- | MIAPPE version is not applicable in BrAPI . Use the 'additionalInfo' field if necessary |
| DM-9 | Associated publication | Trial | trial .publications[] | |
| DM-10 | Study | Study | -- | |
| DM-11 | Study unique ID | Study | study .studyDbId | |
| DM-12 | Study title | Study | study .studyName | |
| DM-13 | Study description | Study | study .studyDescription | |
| DM-14 | Start date of study | Study | study .startDate | |
| DM-15 | End date of study | Study | study .endDate | |
| DM-16 | Contact institution | Location | location .instituteName location .instituteAddress |
|
| DM-17 | Geographic location (country) | Location | location .countryCode location .countryName |
|
| DM-18 | Experimental site name | Location Study |
location .locationName study .locationName |
|
| DM-19 | Geographic location (latitude) | Location | location .coordinates | GeoJSON Structure |
| DM-20 | Geographic location (longitude) | Location | location .coordinates | GeoJSON Structure |
| DM-21 | Geographic location (altitude) | Location | location .coordinates | GeoJSON Structure |
| DM-22 | Description of the experimental design | Study | study .experimentalDesign .description | |
| DM-23 | Type of experimental design | Study | study .experimentalDesign .PUI | |
| DM-24 | Observation unit level hierarchy | Study | study .observationLevels | Also available with 'GET /observationLevels' endpoint |
| DM-25 | Observation unit description | Study | study .observationUnitsDescription | |
| DM-26 | Description of growth facility | Study | study .growthFacility .description | |
| DM-27 | Type of growth facility | Study | study .growthFacility .PUI | |
| DM-28 | Cultural practices | Study | study .culturalPractices | |
| DM-29 | Map of experimental design | -- | -- | There is no direct mapping for MIAPPE DM-29 . Alternative options: A) Use study .additionalInfo to include a file URL B) Use 'GET /observationunits?studyDbId=XYZ' to retrieve the field layout information for a study |
| DM-30 | Person | Contact | -- | The 'contacts' array is embedded in both the Trial and Study entities |
| DM-31 | Person name | Trial Study |
trial .contacts[] .name study .contacts[] .name |
|
| DM-32 | Person email | Trial Study |
trial .contacts[] .email study .contacts[] .email |
|
| DM-33 | Person ID | Trial Study |
trial .contacts[] .contactDbId trial .contacts[] .orcid study .contacts[] .contactDbId study .contacts[] .orcid |
|
| DM-34 | Person role | Trial Study |
trial .contacts[] .type study .contacts[] .type |
|
| DM-35 | Person affiliation | Trial Study |
trial .contacts[] .instituteName study .contacts[] .instituteName |
|
| DM-36 | Data File | Study | study .dataLinks[] | |
| DM-37 | Data file link | Study | study .dataLinks[] .url | |
| DM-38 | Data file description | Study | study .dataLinks[] .name study .dataLinks[] .description study .dataLinks[] .dataFormat study .dataLinks[] .fileFormat |
|
| DM-39 | Data file version | Study | study .dataLinks[] .version | |
| DM-40 | Biological Material | Germplasm | -- | |
| DM-41 | Biological | Germplasm | germplasm .germplasmDbId germplasm .germplasmPUI |
|
| DM-42 | Organism | Germplasm | germplasm .taxonIds[] | |
| DM-43 | Genus | Germplasm | germplasm .genus | |
| DM-44 | Species | Germplasm | germplasm .species | |
| DM-44' | Infra-specific name | Germplasm | germplasm .subtaxa | |
| DM-45 | Biological material latitude | -- | -- | There is no direct mapping for MIAPPE DM-45 . |
| DM-46 | Biological material longitude | -- | -- | There is no direct mapping for MIAPPE DM-46 . |
| DM-47 | Biological material altitude | -- | -- | There is no direct mapping for MIAPPE DM-47 . |
| DM-48 | Biological material coordinates uncertainty | -- | -- | There is no direct mapping for MIAPPE DM-48 . |
| DM-49 | Biological material preprocessing | Germplasm | germplasm .germplasmPreprocessing | |
| DM-50 | Material source ID | Germplasm | germplasm .donors[] .donorInstituteCode germplasm .donors[] .donorAccessionNumber |
|
| DM-51 | Material source DOI | Germplasm | germplasm .donors[] .germplasmPUI | |
| DM-52 | Material source latitude | Germplasm | germplasm .germplasmOrigin .coordinates | GeoJSON structure |
| DM-53 | Material source longitude | Germplasm | germplasm .germplasmOrigin .coordinates | GeoJSON structure |
| DM-54 | Material source altitude | Germplasm | germplasm .germplasmOrigin .coordinates | GeoJSON structure |
| DM-55 | Material source coordinates uncertainty | Germplasm | germplasm .germplasmOrigin .coordinateUncertainty | |
| DM-56 | Material source description | Germplasm | germplasm .seedSourceDescription | |
| DM-57 | Environment | Study | study .environmentParameters[] | |
| DM-58 | Environment parameter | Study | study .environmentParameters[] .parameterName | |
| DM-59 | Environment parameter value | Study | study .environmentParameters[] .value | |
| DM-60 | Experimental Factor | Observation Unit | observationUnit .treatments[] | |
| DM-61 | Experimental Factor type | Observation Unit | observationUnit .treatments[] .factor | |
| DM-62 | Experimental Factor description | Observation Unit | observationUnit .treatments[] .modality | |
| DM-63 | Experimental Factor values | Observation Unit | observationUnit .treatments[] .modality | |
| DM-64 | Event | Event | -- | |
| DM-65 | Event type | Event | event .eventType | |
| DM-66 | Event accession number | Event | event .eventTypeDbId | |
| DM-67 | Event description | Event | event .eventDescription | |
| DM-68 | Event date | Event | event .date | |
| DM-69 | Observation Unit | Observation Unit | -- | |
| DM-70 | Observation unit ID | Observation Unit | observationUnit .observationUnitDbId | |
| DM-71 | Observation unit type | Observation Unit | observationUnit .observationUnitPosition .observationLevel | |
| DM-72 | External ID | Observation Unit | observationUnit .observationUnitPUI | |
| DM-73 | Spatial distribution | Observation Unit | observationUnit .observationUnitPosition | |
| DM-74 | Observation Unit factor value | Observation Unit | observationUnit .treatments[] | |
| DM-75 | Sample | Sample | -- | |
| DM-76 | Sample ID | Sample | sample .sampleDbId | |
| DM-77 | Plant structure development stage | Sample | sample .tissueType sample .sampleDescription |
|
| DM-78 | Plant anatomical entity | Sample | sample .tissueType | |
| DM-79 | Sample description | Sample | sample .sampleDescription | |
| DM-80 | Collection date | Sample | sample .sampleTimestamp | |
| DM-81 | External ID | Sample | sample .samplePUI | |
| DM-82 | Observed Variable | Observation Variable | -- | |
| DM-83 | Variable ID | Observation Variable | observationVariable .observationVariableDbId | |
| DM-84 | Variable name | Observation Variable | observationVariable .observationVariableName | |
| DM-85 | Variable accession number | Observation Variable | observationVariable .ontologyReference | |
| DM-86 | Trait | Observation Variable | observationVariable .trait .traitName | |
| DM-87 | Trait accession number | Observation Variable | observationVariable .trait .ontologyReference | |
| DM-88 | Method | Observation Variable | observationVariable .method .name | |
| DM-89 | Method accession number | Observation Variable | observationVariable .method .ontologyReference | |
| DM-90 | Method description | Observation Variable | observationVariable .method .description | |
| DM-91 | Reference associated to the method | Observation Variable | observationVariable .method .bibliographicalReference | |
| DM-92 | Scale | Observation Variable | observationVariable .scale .scaleName | |
| DM-93 | Scale accession number | Observation Variable | observationVariable .scale .ontologyReference | |
| DM-94 | Time scale | -- | -- | There is no direct mapping for MIAPPE DM-94 . |