-
Notifications
You must be signed in to change notification settings - Fork 0
/
DESCRIPTION
34 lines (34 loc) · 1.03 KB
/
DESCRIPTION
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
Package: sechm
Type: Package
Title: sechm: Complex Heatmaps from a SummarizedExperiment
Version: 1.9.5
Authors@R: person("Pierre-Luc", "Germain", email="pierre-luc.germain@hest.ethz.ch", role=c("cre","aut"), comment=c(ORCID="0000-0003-3418-4218"))
Description:
sechm provides a simple interface between SummarizedExperiment objects and the ComplexHeatmap package.
It enables plotting annotated heatmaps from SE objects, with easy access to rowData and colData columns,
and implements a number of features to make the generation of heatmaps easier and more flexible.
These functionalities used to be part of the SEtools package.
Depends:
R (>= 4.0),
SummarizedExperiment,
ComplexHeatmap
Imports:
S4Vectors,
seriation,
circlize,
methods,
randomcoloR,
stats,
grid,
grDevices,
matrixStats
Suggests:
BiocStyle,
knitr,
rmarkdown
biocViews: GeneExpression, Visualization
VignetteBuilder: knitr
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.2.3
BugReports: https://github.com/plger/sechm