templates/ml-advanced/README.ipynb

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   "source": [
    "To run this locally, [install Ploomber](https://docs.ploomber.io/en/latest/get-started/quick-start.html) and execute: `ploomber examples -n templates/ml-advanced`\n",
    "\n",
    "Found an issue? [Let us know.](https://github.com/ploomber/projects/issues/new?title=templates/ml-advanced%20issue)\n",
    "\n",
    "Questions? [Ask us on Slack.](https://ploomber.io/community/)\n"
   ]
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   "source": [
    "# ML advanced\n",
    "\n",
    "<!-- start description -->\n",
    "ML pipeline using the Python API. Shows how to create a Python package, test it with pytest, and train models in parallel.\n",
    "<!-- end description -->\n",
    "\n",
    "## Setup"
   ]
  },
  {
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      "Requirement already satisfied: webencodings in /home/codespace/.local/lib/python3.10/site-packages (from bleach->nbconvert>=5.6.0->ploomber->ml-advanced==0.1.dev0) (0.5.1)\n",
      "Requirement already satisfied: colorama in /usr/local/python/3.10.4/lib/python3.10/site-packages (from debuglater->ploomber-engine>=0.0.8->ploomber->ml-advanced==0.1.dev0) (0.4.5)\n",
      "Requirement already satisfied: pure-eval in /home/codespace/.local/lib/python3.10/site-packages (from stack-data->ipython->ploomber->ml-advanced==0.1.dev0) (0.2.2)\n",
      "Requirement already satisfied: executing in /home/codespace/.local/lib/python3.10/site-packages (from stack-data->ipython->ploomber->ml-advanced==0.1.dev0) (1.1.1)\n",
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      "Installing collected packages: ml-advanced\n",
      "  Attempting uninstall: ml-advanced\n",
      "    Found existing installation: ml-advanced 0.1.dev0\n",
      "    Uninstalling ml-advanced-0.1.dev0:\n",
      "      Successfully uninstalled ml-advanced-0.1.dev0\n",
      "  Running setup.py develop for ml-advanced\n",
      "Successfully installed ml-advanced\n"
     ]
    }
   ],
   "source": [
    "%%sh\n",
    "pip install -r requirements.txt\n",
    "pip install --editable ."
   ]
  },
  {
   "cell_type": "markdown",
   "id": "7fe7f6ae",
   "metadata": {},
   "source": [
    "## Build"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "id": "fa2e95a8",
   "metadata": {
    "execution": {
     "iopub.execute_input": "2021-10-28T01:34:34.755642Z",
     "iopub.status.busy": "2021-10-28T01:34:34.754656Z",
     "iopub.status.idle": "2021-10-28T01:35:17.177417Z",
     "shell.execute_reply": "2021-10-28T01:35:17.175059Z"
    },
    "papermill": {
     "duration": 42.451428,
     "end_time": "2021-10-28T01:35:17.177928",
     "exception": false,
     "start_time": "2021-10-28T01:34:34.726500",
     "status": "completed"
    },
    "tags": []
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Loading pipeline...\n",
      "Finished: 'features', 'fit-ml-advanced--models--logistic-reg', 'fit-ml-advanced--models--svc', 'fit-sklearn--ensemble--RandomForestClassifier', 'get', and 'join'\n",
      "Remaining: \n",
      "Finished 6 out of 6 tasks\n",
      "name                                   Ran?      Elapsed (s)    Percentage\n",
      "-------------------------------------  ------  -------------  ------------\n",
      "get                                    False               0             0\n",
      "features                               False               0             0\n",
      "join                                   False               0             0\n",
      "fit-sklearn--ensemble--                False               0             0\n",
      "RandomForestClassifier\n",
      "fit-ml-advanced--models--logistic-reg  False               0             0\n",
      "fit-ml-advanced--models--svc           False               0             0\n"
     ]
    },
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "0it [00:00, ?it/s]\n"
     ]
    }
   ],
   "source": [
    "%%sh\n",
    "ploomber build --entry-point ml_advanced.pipeline.make"
   ]
  },
  {
   "cell_type": "markdown",
   "id": "caa65939",
   "metadata": {
    "papermill": {
     "duration": 0.028482,
     "end_time": "2021-10-28T01:35:17.243125",
     "exception": false,
     "start_time": "2021-10-28T01:35:17.214643",
     "status": "completed"
    },
    "tags": []
   },
   "source": [
    "## Testing"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "id": "54ee76de",
   "metadata": {
    "execution": {
     "iopub.execute_input": "2021-10-28T01:35:17.398313Z",
     "iopub.status.busy": "2021-10-28T01:35:17.397035Z",
     "iopub.status.idle": "2021-10-28T01:35:56.222825Z",
     "shell.execute_reply": "2021-10-28T01:35:56.224413Z"
    },
    "papermill": {
     "duration": 38.856798,
     "end_time": "2021-10-28T01:35:56.224693",
     "exception": false,
     "start_time": "2021-10-28T01:35:17.367895",
     "status": "completed"
    },
    "tags": []
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "============================= test session starts ==============================\n",
      "platform linux -- Python 3.10.4, pytest-7.1.3, pluggy-1.0.0\n",
      "rootdir: /workspaces/projects/templates/ml-advanced\n",
      "plugins: anyio-3.6.1\n",
      "collected 1 item\n",
      "\n",
      "tests/test_pipeline.py .                                                 [100%]\n",
      "\n",
      "=============================== warnings summary ===============================\n",
      "../../../../home/codespace/.local/lib/python3.10/site-packages/joblib/backports.py:22\n",
      "  /home/codespace/.local/lib/python3.10/site-packages/joblib/backports.py:22: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives\n",
      "    import distutils  # noqa\n",
      "\n",
      "../../../../usr/local/python/3.10.4/lib/python3.10/site-packages/ansiwrap/core.py:6\n",
      "  /usr/local/python/3.10.4/lib/python3.10/site-packages/ansiwrap/core.py:6: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses\n",
      "    import imp\n",
      "\n",
      "tests/test_pipeline.py::test_pipeline\n",
      "  /usr/local/python/3.10.4/lib/python3.10/site-packages/ploomber/dag/dag.py:301: UserWarning: The DAG \"ml-pipeline\" entered in an inconsistent state: trying to set DAG status to DAGStatus.Executed but executor returned tasks whose status is not TaskStatus.Executed nor TaskStatus.Skipped, returned status: {<TaskStatus.WaitingUpstream: 'waiting_upstream'>, <TaskStatus.WaitingExecution: 'waiting_execution'>}\n",
      "    warnings.warn('The DAG \"{}\" entered in an inconsistent '\n",
      "\n",
      "-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html\n",
      "======================== 1 passed, 3 warnings in 30.11s ========================\n"
     ]
    }
   ],
   "source": [
    "%%bash\n",
    "# complete (force execution of all tasks)\n",
    "pytest --force"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "id": "aa8cf4e9",
   "metadata": {
    "execution": {
     "iopub.execute_input": "2021-10-28T01:35:56.264795Z",
     "iopub.status.busy": "2021-10-28T01:35:56.263884Z",
     "iopub.status.idle": "2021-10-28T01:36:01.121696Z",
     "shell.execute_reply": "2021-10-28T01:36:01.122397Z"
    },
    "papermill": {
     "duration": 4.883103,
     "end_time": "2021-10-28T01:36:01.122670",
     "exception": false,
     "start_time": "2021-10-28T01:35:56.239567",
     "status": "completed"
    },
    "tags": []
   },
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "============================= test session starts ==============================\n",
      "platform linux -- Python 3.10.4, pytest-7.1.3, pluggy-1.0.0\n",
      "rootdir: /workspaces/projects/templates/ml-advanced\n",
      "plugins: anyio-3.6.1\n",
      "collected 1 item\n",
      "\n",
      "tests/test_pipeline.py .                                                 [100%]\n",
      "\n",
      "=============================== warnings summary ===============================\n",
      "../../../../home/codespace/.local/lib/python3.10/site-packages/joblib/backports.py:22\n",
      "  /home/codespace/.local/lib/python3.10/site-packages/joblib/backports.py:22: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives\n",
      "    import distutils  # noqa\n",
      "\n",
      "../../../../usr/local/python/3.10.4/lib/python3.10/site-packages/ansiwrap/core.py:6\n",
      "  /usr/local/python/3.10.4/lib/python3.10/site-packages/ansiwrap/core.py:6: DeprecationWarning: the imp module is deprecated in favour of importlib and slated for removal in Python 3.12; see the module's documentation for alternative uses\n",
      "    import imp\n",
      "\n",
      "-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html\n",
      "======================== 1 passed, 2 warnings in 2.70s =========================\n"
     ]
    }
   ],
   "source": [
    "%%bash\n",
    "# incremental (will only run the tasks that have changed)\n",
    "pytest"
   ]
  }
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