Unable to generate a heat map plot generated by cummeRbund

[leonardomarino]

Hi,

I am using the following commands:

library(cummeRbund)
library(plotly)
cuff_data <- readCufflinks('CLL-all-cuffdiff_out')
mySigGeneIds<-getSig(cuff_data,alpha=0.02,level='genes')
mySigGenes<-getGenes(cuff_data,mySigGeneIds)
py <- plotly()
myHeatmap<-csHeatmap(mySigGenes,cluster='row')
myHeatmap
r <- py$ggplotly(myHeatmap)
Error in gg2list(gg) : No exportable traces
In addition: Warning message:
In layer2traces(L, df, misc, trace.list$plot) :
Conversion not implemented for geom_rect (basic geom_rect), ignoring. Please open an issue with your example code at https://github.com/ropensci/plotly/issues

[msund]

@leonardomarino we're close now. We were able to just make this one with ggplot2: https://plot.ly/~MattSundquist/1942.