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EPInorm to replace EPI->T1w->MNI registration #620
The original paper used an EPI template instead of a T2w one (which we would have to use if we wanted to stick to 2009c) https://twitter.com/vdcalhoun/status/890217862010355713
Looking at the EPI/T2 templates in SPM12, these at least are very similar; EPI.nii basically looks like a skull-stripped version of T2.nii. I haven't looked at the 2009c ones, but at a first pass, I'd think skull-stripping the T2w template and rescaling to match the EPI (as we do in creating the inverse T1w image) would get us to a similar starting point as EPInorm.
I'd think an
I feel like a major test of the (EPI -> MNI -> T1w) pipeline replacing SyN-SDC would be surface-sampling.
I'll give the paper a close reading and share my notes.