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fatal build error: missing DistanceMatrix.hpp #1

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lneaves opened this issue Jun 4, 2019 · 5 comments
Closed

fatal build error: missing DistanceMatrix.hpp #1

lneaves opened this issue Jun 4, 2019 · 5 comments

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@lneaves
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lneaves commented Jun 4, 2019

Hello,
Following the instructions to build ASTRID2 but build terminated saying the DistanceMatrix.hpp did not exist. Details below. Any ideas on what went wrong? Thanks

user@tobyg2:/ASTRID/build$ cmake ../src
-- The C compiler identification is GNU 7.4.0
-- The CXX compiler identification is GNU 7.4.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Found Java: /usr/lib/jvm/java-11-oracle/bin/java (found version "11.0.2")
-- Found JNI: /usr/lib/jvm/java-11-oracle/lib/libjawt.so
-- Configuring done
-- Generating done
-- Build files have been written to: /home/user/ASTRID/build
user@tobyg2:
/ASTRID/build$ make
Scanning dependencies of target Test
[ 1%] Building CXX object CMakeFiles/Test.dir/FastMEInterface.cpp.o
In file included from /home/linda_n/ASTRID/src/FastMEInterface.cpp:1:0:
/home/user/ASTRID/src/DistanceMethods.hpp:8:10: fatal error: DistanceMatrix.hpp: No such file or directory
#include <DistanceMatrix.hpp>
^~~~~~~~~~~~~~~~~~~~
compilation terminated.
CMakeFiles/Test.dir/build.make:62: recipe for target 'CMakeFiles/Test.dir/FastMEInterface.cpp.o' failed
make[2]: *** [CMakeFiles/Test.dir/FastMEInterface.cpp.o] Error 1
CMakeFiles/Makefile2:67: recipe for target 'CMakeFiles/Test.dir/all' failed
make[1]: *** [CMakeFiles/Test.dir/all] Error 2
Makefile:129: recipe for target 'all' failed
make: *** [all] Error 2
user@tobyg2:~/ASTRID/build$

@Kevin-Ziegler
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I get the same error!

@theo-llewellyn
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same here

@pschafran
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Same

@milag6
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milag6 commented Apr 1, 2020

Yes, same

@pranjalv123
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Sorry for the long delay getting this fixed - I've updated the build system to (hopefully) get rid of these dependency issues, and precompiled executables are now automatically generated at each commit and are available at https://github.com/pranjalv123/ASTRID/releases.

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