Tasks do not run in the active environment by default.

[RaphaelMelanconAtBentley]

Checks

• I have checked that this issue has not already been reported.

• I have confirmed this bug exists on the latest version of pixi, using pixi --version.

Reproducible example

[project]
name = "Project"
channels = ["conda-forge"]
platforms = ["linux-64"]

#@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ FEATURES @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@#
### Python #####################################################################
[feature.python.dependencies]
python = "~=3.11.9"
pip = "~=24.0"

### Testing ####################################################################
[feature.testing.pypi-dependencies]
pytest = "~=8.2.0"
pytest-cov = "~=5.0.0"
pytest-mock = "~=3.14.0"
pytest-xdist = "~=3.6.1"

### Linting ####################################################################
[feature.linting.tasks]
ruff-format = {cmd = ["ruff", "format", "."], cwd = "."}
ruff-format-check = {cmd = ["ruff", "format", "--check", "--verbose"], cwd = "."}
ruff-lint = {cmd = ["ruff", "check", "--fix"], cwd = "."}
ruff-lint-check = {cmd = ["ruff", "check", "--verbose", "--statistics"], cwd = "."}
fix-code = {depends-on = ["ruff-format", "ruff-lint"]}
check-code = {depends-on = ["ruff-format-check", "ruff-lint-check"]}

[feature.linting.pypi-dependencies]
ruff = "~=0.4.0"

#@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@ ENVIRONMENTS @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@#
[environments]
### CI/DC ######################################################################
testing = {features = ["python", "testing", "linting"]}
linting = {features = ["python", "linting"]}

Running pixi shell -e linting then pixi run fix-code results in:

(Project:linting) nonRootUser@07ee445679d4:/workspaces/Project$ pixi run fix-code
? The task 'fix-code' can be run in multiple environments.

Please select an environment to run the task in: ›
❯ testing
  linting

Issue description

Pixi does not seem to care about the active environment when running tasks.

Expected behavior

Should use the activate environment by default if the task is available in it.