Installation problem - Rtools is required on Windows

[dansjost]

Hello,
You have been kind and answeded my beginner questions on stackoverflow regarding fopreach questions and parallellisationi, my alias there is Newbie80. I have been Reading your intro to foreach and now I am trying to install bigstatsr with the following

For the current development version

devtools::install_github("privefl/bigstatsr")

However I get the following message when I try to install, do you have any idea why?

Regards
Dan

devtools::install_github("privefl/bigstatsr")
Downloading GitHub repo privefl/bigstatsr@master
from URL https://api.github.com/repos/privefl/bigstatsr/zipball/master
trying URL 'https://cran.rstudio.com/bin/windows/Rtools/Rtools34.exe'
Content type 'application/x-msdos-program' length 108085090 bytes (103.1 MB)
downloaded 103.1 MB

WARNING: Rtools is required to build R packages, but is not currently installed.

Please download and install Rtools 3.4 from http://cran.r-project.org/bin/windows/Rtools/.
Installation failed: Could not find build tools necessary to build bigstatsr

library(bigstatsr)
Error in library(bigstatsr) : there is no package called ‘bigstatsr’
mat3 <- FBM(5, 8)
Error in FBM(5, 8) : could not find function "FBM"
cl <- parallel::makeCluster(2)
doParallel::registerDoParallel(cl)
tmp3 <- foreach(j = 1:8, .combine = 'c') %:%

• foreach(i = 1:5, .combine = 'c') %dopar% {

• mat3[i, j] <- i + j
  

• NULL
  

• }
  Error in { : task 1 failed - "object 'mat3' not found"

parallel::stopCluster(cl)
mat3[]
Error: object 'mat3' not found
mat3 <- FBM(5, 8)
Error in FBM(5, 8) : could not find function "FBM"
library(bigstatsr)
Error in library(bigstatsr) : there is no package called ‘bigstatsr’
install.packages("C:/Users/dasj/Desktop/bigstatsr-master.zip", repos = NULL, type = "win.binary")
Installing package into ‘C:/Users/dasj/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
library(bigstatsr)
Error in library(bigstatsr) : there is no package called ‘bigstatsr’
install.packages("C:/Users/dasj/Desktop/bigstatsr-master/bigstatsr-master/bigstatsr.Rproj", repos = NULL)
Installing package into ‘C:/Users/dasj/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
Error in install.packages : type == "both" cannot be used with 'repos = NULL'
devtools::install_github("privefl/bigstatsr")
Downloading GitHub repo privefl/bigstatsr@master
from URL https://api.github.com/repos/privefl/bigstatsr/zipball/master
Installing bigstatsr
Installing 1 package: BH
Installing package into ‘C:/Users/dasj/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/BH_1.66.0-1.zip'
Content type 'application/zip' length 17880018 bytes (17.1 MB)
downloaded 17.1 MB

package ‘BH’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in
C:\Users\dasj\AppData\Local\Temp\RtmpKIyHpJ\downloaded_packages
Installing 1 package: cowplot
Installing package into ‘C:/Users/dasj/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
also installing the dependencies ‘colorspace’, ‘lazyeval’, ‘reshape2’, ‘munsell’, ‘ggplot2’, ‘plyr’, ‘scales’

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/colorspace_1.3-2.zip'
Content type 'application/zip' length 445654 bytes (435 KB)
downloaded 435 KB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/lazyeval_0.2.1.zip'
Content type 'application/zip' length 140066 bytes (136 KB)
downloaded 136 KB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/reshape2_1.4.3.zip'
Content type 'application/zip' length 611951 bytes (597 KB)
downloaded 597 KB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/munsell_0.5.0.zip'
Content type 'application/zip' length 220479 bytes (215 KB)
downloaded 215 KB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/ggplot2_3.0.0.zip'
Content type 'application/zip' length 3146953 bytes (3.0 MB)
downloaded 3.0 MB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/plyr_1.8.4.zip'
Content type 'application/zip' length 1219076 bytes (1.2 MB)
downloaded 1.2 MB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/scales_0.5.0.zip'
Content type 'application/zip' length 693959 bytes (677 KB)
downloaded 677 KB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/cowplot_0.9.2.zip'
Content type 'application/zip' length 2444938 bytes (2.3 MB)
downloaded 2.3 MB

package ‘colorspace’ successfully unpacked and MD5 sums checked
package ‘lazyeval’ successfully unpacked and MD5 sums checked
package ‘reshape2’ successfully unpacked and MD5 sums checked
package ‘munsell’ successfully unpacked and MD5 sums checked
package ‘ggplot2’ successfully unpacked and MD5 sums checked
package ‘plyr’ successfully unpacked and MD5 sums checked
package ‘scales’ successfully unpacked and MD5 sums checked
package ‘cowplot’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in
C:\Users\dasj\AppData\Local\Temp\RtmpKIyHpJ\downloaded_packages
Installing 1 package: data.table
Installing package into ‘C:/Users/dasj/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/data.table_1.11.4.zip'
Content type 'application/zip' length 1813443 bytes (1.7 MB)
downloaded 1.7 MB

package ‘data.table’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in
C:\Users\dasj\AppData\Local\Temp\RtmpKIyHpJ\downloaded_packages
Skipping install of 'ggplot2' from a cran remote, the SHA1 (3.0.0) has not changed since last install.
Use force = TRUE to force installation
Installing 1 package: Rcpp
Installing package into ‘C:/Users/dasj/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/Rcpp_0.12.17.zip'
Content type 'application/zip' length 4374761 bytes (4.2 MB)
downloaded 4.2 MB

package ‘Rcpp’ successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package ‘Rcpp’

The downloaded binary packages are in
C:\Users\dasj\AppData\Local\Temp\RtmpKIyHpJ\downloaded_packages
Installing 1 package: RcppArmadillo
Installing package into ‘C:/Users/dasj/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
also installing the dependency ‘Rcpp’

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/Rcpp_0.12.17.zip'
Content type 'application/zip' length 4374761 bytes (4.2 MB)
downloaded 4.2 MB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/RcppArmadillo_0.8.600.0.0.zip'
Content type 'application/zip' length 2251246 bytes (2.1 MB)
downloaded 2.1 MB

package ‘Rcpp’ successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package ‘Rcpp’
package ‘RcppArmadillo’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in
C:\Users\dasj\AppData\Local\Temp\RtmpKIyHpJ\downloaded_packages
Installing 1 package: RSpectra
Installing package into ‘C:/Users/dasj/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
also installing the dependencies ‘Rcpp’, ‘RcppEigen’

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/Rcpp_0.12.17.zip'
Content type 'application/zip' length 4374761 bytes (4.2 MB)
downloaded 4.2 MB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/RcppEigen_0.3.3.4.0.zip'
Content type 'application/zip' length 2663519 bytes (2.5 MB)
downloaded 2.5 MB

trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/RSpectra_0.13-1.zip'
Content type 'application/zip' length 1234715 bytes (1.2 MB)
downloaded 1.2 MB

package ‘Rcpp’ successfully unpacked and MD5 sums checked
Warning: cannot remove prior installation of package ‘Rcpp’
package ‘RcppEigen’ successfully unpacked and MD5 sums checked
package ‘RSpectra’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in
C:\Users\dasj\AppData\Local\Temp\RtmpKIyHpJ\downloaded_packages
"C:/PROGRA1/R/R-341.3/bin/x64/R" --no-site-file --no-environ --no-save --no-restore --quiet CMD INSTALL
"C:/Users/dasj/AppData/Local/Temp/RtmpKIyHpJ/devtools2c483778d3/privefl-bigstatsr-c6410a9" --library="C:/Users/dasj/Documents/R/win-library/3.4" --install-tests

ERROR: dependency 'Rcpp' is not available for package 'bigstatsr'

• removing 'C:/Users/dasj/Documents/R/win-library/3.4/bigstatsr'
  In R CMD INSTALL
  Installation failed: Command failed (1)

[privefl]

Have you installed Rtools?

[dansjost]

I do, I reinstalled it again and I get the same message

[privefl]

Restart your computer, install Rtools 3.4 and then try to install {bigstatsr}.
It should work.

If it still doesn't work, please see this blog post.

[dansjost]

The installation went much further but I still get an error
I restarted the computer , installed Rtools 3.4 and starterd R

For the current development version

devtools::install_github("privefl/bigstatsr")
Downloading GitHub repo privefl/bigstatsr@master
from URL https://api.github.com/repos/privefl/bigstatsr/zipball/master
Installing bigstatsr
Installing 1 package: Rcpp
Installing package into ‘C:/Users/dasj/Documents/R/win-library/3.4’
(as ‘lib’ is unspecified)
trying URL 'https://cran.rstudio.com/bin/windows/contrib/3.4/Rcpp_0.12.17.zip'
Content type 'application/zip' length 4374761 bytes (4.2 MB)
downloaded 4.2 MB

package ‘Rcpp’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in
C:\Users\dasj\AppData\Local\Temp\RtmpcP4PRq\downloaded_packages
"C:/PROGRA1/R/R-341.3/bin/x64/R" --no-site-file --no-environ --no-save --no-restore --quiet CMD INSTALL
"C:/Users/dasj/AppData/Local/Temp/RtmpcP4PRq/devtools15f82087728a/privefl-bigstatsr-800fd0b" --library="C:/Users/dasj/Documents/R/win-library/3.4" --install-tests

• installing source package 'bigstatsr' ...
  ** libs

*** arch - i386
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c AUC.cpp -o AUC.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c FBM.cpp -o FBM.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c biglassoLin.cpp -o biglassoLin.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c biglassoLog.cpp -o biglassoLog.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c biglassoUtils.cpp -o biglassoUtils.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c colstats.cpp -o colstats.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c counts.cpp -o counts.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c createFile.cpp -o createFile.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c decode.cpp -o decode.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c errorMsgs.cpp -o errorMsgs.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c extract.cpp -o extract.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c nlines.cpp -o nlines.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c prodMatVec.cpp -o prodMatVec.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c replace.cpp -o replace.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c transpose.cpp -o transpose.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c univRegLin5.cpp -o univRegLin5.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c univRegLog.cpp -o univRegLog.o
c:/Rtools/mingw_32/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c utils-mat.cpp -o utils-mat.o
c:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o bigstatsr.dll tmp.def AUC.o FBM.o RcppExports.o biglassoLin.o biglassoLog.o biglassoUtils.o colstats.o counts.o createFile.o decode.o errorMsgs.o extract.o nlines.o prodMatVec.o replace.o transpose.o univRegLin5.o univRegLog.o utils-mat.o -LC:/PROGRA1/R/R-341.3/bin/i386 -lRlapack -LC:/PROGRA1/R/R-341.3/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/PROGRA1/R/R-341.3/bin/i386 -lR
installing to C:/Users/dasj/Documents/R/win-library/3.4/bigstatsr/libs/i386

*** arch - x64
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c AUC.cpp -o AUC.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c FBM.cpp -o FBM.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c RcppExports.cpp -o RcppExports.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c biglassoLin.cpp -o biglassoLin.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c biglassoLog.cpp -o biglassoLog.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c biglassoUtils.cpp -o biglassoUtils.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c colstats.cpp -o colstats.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c counts.cpp -o counts.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c createFile.cpp -o createFile.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c decode.cpp -o decode.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c errorMsgs.cpp -o errorMsgs.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c extract.cpp -o extract.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c nlines.cpp -o nlines.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c prodMatVec.cpp -o prodMatVec.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c replace.cpp -o replace.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c transpose.cpp -o transpose.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c univRegLin5.cpp -o univRegLin5.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c univRegLog.cpp -o univRegLog.o
c:/Rtools/mingw_64/bin/g++ -I"C:/PROGRA1/R/R-341.3/include" -DNDEBUG -I../inst/include -DARMA_DONT_PRINT_OPENMP_WARNING -DARMA_DONT_PRINT_CXX11_WARNING -I"C:/Users/dasj/Documents/R/win-library/3.4/BH/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/Rcpp/include" -I"C:/Users/dasj/Documents/R/win-library/3.4/RcppArmadillo/include" -O2 -Wall -mtune=generic -c utils-mat.cpp -o utils-mat.o
c:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o bigstatsr.dll tmp.def AUC.o FBM.o RcppExports.o biglassoLin.o biglassoLog.o biglassoUtils.o colstats.o counts.o createFile.o decode.o errorMsgs.o extract.o nlines.o prodMatVec.o replace.o transpose.o univRegLin5.o univRegLog.o utils-mat.o -LC:/PROGRA1/R/R-341.3/bin/x64 -lRlapack -LC:/PROGRA1/R/R-341.3/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/PROGRA1/R/R-341.3/bin/x64 -lR
installing to C:/Users/dasj/Documents/R/win-library/3.4/bigstatsr/libs/x64
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
Error : object 'enexprs' is not exported by 'namespace:rlang'
ERROR: lazy loading failed for package 'bigstatsr'

• removing 'C:/Users/dasj/Documents/R/win-library/3.4/bigstatsr'
  In R CMD INSTALL
  Installation failed: Command failed (1)

[dansjost]

I found it, I also had to install the package rlang from github :)

devtools::install_github("r-lib/rlang")

Thanks!!