v1.6_series.rst

ProDy 1.6 Series

• 1.6.1 (May 31, 2015)
• 1.5 (Dec 23, 2013)

1.6.1 (May 31, 2015)

Changes:

• :func:`searchPfam` uses hmmer for given sequence inputs instead of pfam search.

1.5 (Dec 23, 2013)

New Features:

• :func:`.buildPCMatrix` is implemented for calculation of coevolution with PSICOV method from multiple sequence alignments.
• :func:`specMergeMSA` is implemented for merging multiple sequence alignment files based on the species identifiers of sequences.
• :class:`.exANM` is implemented for explicit membrane ANM calculations.
• :func:`.writeMembranePDB` is implemented for writing PDB structures of created membranes for exANM class.