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file.go
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package schemav2
import (
"encoding/json"
"errors"
"fmt"
"io"
"log"
"os"
"time"
"github.com/aws/aws-sdk-go/aws"
"github.com/aws/aws-sdk-go/service/dynamodb"
"github.com/psanford/donutdb/internal/changelog"
"github.com/psanford/donutdb/internal/dynamo"
"github.com/psanford/donutdb/internal/lock"
"github.com/psanford/donutdb/sectorcache"
"github.com/psanford/sqlite3vfs"
)
type File struct {
dataRowKey string
rawName string
randID string
sectorSize int64
closed bool
changeLogWriter *json.Encoder
db *dynamodb.DynamoDB
table string
sectcache sectorcache.CacheV2
sectorWriter *SectorWriter
cachedSize int64
lockManager lock.LockManager
}
func FileFromMeta(meta *dynamo.FileMetaV1V2, table, ownerID string, db *dynamodb.DynamoDB, changeLogWriter *json.Encoder, cache sectorcache.CacheV2) (*File, error) {
if meta.MetaVersion != 2 {
return nil, fmt.Errorf("cannot instanciate schemav2 file for MetaVersion=%d", meta.MetaVersion)
}
if cache == nil {
cache = &nopCache{}
}
f := File{
dataRowKey: dynamo.FileDataPrefix + meta.RandID + "-" + meta.OrigName,
rawName: meta.OrigName,
randID: meta.RandID,
sectorSize: meta.SectorSize,
table: table,
db: db,
changeLogWriter: changeLogWriter,
sectcache: cache,
lockManager: lock.NewGlobalLockManger(db, table, meta.LockRowKey, ownerID),
}
return &f, nil
}
func (f *File) Close() error {
f.closed = true
f.Sync(sqlite3vfs.SyncNormal)
err := f.lockManager.Close()
if err != nil {
return err
}
return nil
}
func (f *File) ReadAt(p []byte, off int64) (retN int, retErr error) {
if f.changeLogWriter != nil {
r := changelog.Record{
TS: time.Now(),
Action: "ReadAtStart",
FName: f.rawName,
Off: off,
}
f.changeLogWriter.Encode(r)
defer func() {
r := changelog.Record{
TS: time.Now(),
Action: "ReadAtComplete",
P: p,
Off: off,
FName: f.rawName,
RetCount: retN,
RetError: retErr,
}
f.changeLogWriter.Encode(r)
}()
}
if f.closed {
return 0, os.ErrClosed
}
if f.sectorWriter != nil {
err := f.sectorWriter.Flush()
if err != nil {
return 0, err
}
f.sectorWriter = nil
}
firstSectorIdx := f.sectorIdxForPos(off)
meta, err := f.currentMeta()
if err != nil {
return 0, err
}
lastByte := off + int64(len(p)) - 1
lastSectorIdx := f.sectorIdxForPos(lastByte) + 1
if firstSectorIdx >= len(meta.Sectors) {
return 0, io.EOF
}
if lastSectorIdx > len(meta.Sectors) {
lastSectorIdx = len(meta.Sectors)
}
sectors := meta.Sectors[firstSectorIdx:lastSectorIdx]
var sect Sector
iter := f.newSectorIterator(§, sectors)
var (
n int
first = true
iterCount int
prevSeenSize = f.sectorSize
)
for iter.Next() {
if prevSeenSize != f.sectorSize {
return n, fmt.Errorf("non-full sector detected in the middle of a file idx=%d size=%d", firstSectorIdx+iterCount-1, prevSeenSize)
}
prevSeenSize = int64(len(sect.Data))
if first {
startIndex := off % f.sectorSize
n = copy(p, sect.Data[startIndex:])
first = false
iterCount++
continue
}
nn := copy(p[n:], sect.Data)
n += nn
iterCount++
}
err = iter.Close()
if err == dynamo.SectorNotFoundErr && lastByte >= meta.FileSize {
return n, io.EOF
} else if err != nil {
retErr = err
return n, retErr
}
if lastByte >= meta.FileSize {
return n, io.EOF
}
return n, nil
}
func (f *File) WriteAt(b []byte, off int64) (n int, err error) {
if f.changeLogWriter != nil {
r := changelog.Record{
TS: time.Now(),
Action: "WriteAtStart",
P: b,
Off: off,
FName: f.rawName,
}
f.changeLogWriter.Encode(r)
defer func() {
r := changelog.Record{
TS: time.Now(),
Action: "WriteAtComplete",
Off: off,
FName: f.rawName,
RetCount: n,
RetError: err,
}
f.changeLogWriter.Encode(r)
}()
}
if f.closed {
return 0, os.ErrClosed
}
var writeCount int
meta, err := f.currentMeta()
if err != nil {
return 0, err
}
oldFileSize := meta.FileSize
firstSectorIdx := f.sectorIdxForPos(off)
defer func() {
if off+int64(len(b)) > oldFileSize {
f.cachedSize = off + int64(len(b))
}
}()
if f.sectorWriter == nil {
f.sectorWriter = &SectorWriter{
F: f,
meta: meta,
}
}
if firstSectorIdx >= len(meta.Sectors) {
if meta.FileSize%f.sectorSize != 0 {
// the last sector is not full, we need to fetch it and append to it
idx := len(f.sectorWriter.meta.Sectors) - 1
var sector Sector
if pendingSector, found := f.sectorWriter.pendingWriteSectors[idx]; found {
sector = pendingSector
} else {
lastSectorID := f.sectorWriter.meta.Sectors[idx]
sectors, err := f.getSectors([]string{lastSectorID})
if err != nil {
return writeCount, err
}
sector = sectors[0]
}
additionalCount := int(f.sectorSize) - len(sector.Data)
if additionalCount > 0 {
sector.Data = append(sector.Data, make([]byte, additionalCount)...)
f.sectorWriter.WriteSector(idx, sector.Data)
}
}
for idx := len(meta.Sectors); idx < firstSectorIdx; idx++ {
// create sector as empty
data := make([]byte, f.sectorSize)
err = f.sectorWriter.WriteSector(idx, data)
if err != nil {
return writeCount, fmt.Errorf("fill sector (off=%d) err: %w", int64(idx)*f.sectorSize, err)
}
}
}
posInFile := off
for len(b) > 0 {
dataForSector := int(f.sectorSize)
if posInFile%f.sectorSize != 0 {
dataForSector = int(f.sectorSize - (posInFile % f.sectorSize))
}
if len(b) < dataForSector {
dataForSector = len(b)
}
curSectorData := b[:dataForSector]
b = b[dataForSector:]
offsetIntoSector := int(posInFile % f.sectorSize)
curSectorIdx := f.sectorIdxForPos(posInFile)
if len(curSectorData) != int(f.sectorSize) {
// this is a partial sector, we need to fetch the existing sector data
// to merge with the new data
if pendingSector, found := f.sectorWriter.pendingWriteSectors[curSectorIdx]; found {
existingData := pendingSector.Data
if len(existingData) < offsetIntoSector+len(curSectorData) {
existingData = append(existingData, make([]byte, offsetIntoSector+len(curSectorData)-len(existingData))...)
}
copy(existingData[offsetIntoSector:], curSectorData)
f.sectorWriter.WriteSector(curSectorIdx, existingData)
} else if curSectorIdx >= len(f.sectorWriter.meta.Sectors) {
// this is a new sector
existingData := make([]byte, offsetIntoSector+len(curSectorData))
copy(existingData[offsetIntoSector:], curSectorData)
f.sectorWriter.WriteSector(curSectorIdx, existingData)
} else {
sector, err := f.getSectors([]string{f.sectorWriter.meta.Sectors[curSectorIdx]})
if err != nil {
return writeCount, fmt.Errorf("get sector err: %w", err)
}
existingData := sector[0].Data
if len(existingData) < offsetIntoSector+len(curSectorData) {
existingData = append(existingData, make([]byte, offsetIntoSector+len(curSectorData)-len(existingData))...)
}
copy(existingData[offsetIntoSector:], curSectorData)
f.sectorWriter.WriteSector(curSectorIdx, existingData)
}
} else {
copiedData := make([]byte, len(curSectorData))
copy(copiedData, curSectorData)
f.sectorWriter.WriteSector(curSectorIdx, copiedData)
}
writeCount += dataForSector
posInFile += int64(dataForSector)
curSectorIdx++
}
return writeCount, nil
}
func (f *File) SanityCheckSectors() error {
meta, err := f.currentMeta()
if err != nil {
return err
}
var sect Sector
iter := f.newSectorIterator(§, meta.Sectors)
var seen int64
for iter.Next() {
seen = seen + int64(len(sect.Data))
}
err = iter.Close()
if err != nil {
return err
}
if seen != meta.FileSize {
return fmt.Errorf("file size mismatch: %d != %d", seen, meta.FileSize)
}
return nil
}
func (f *File) Truncate(size int64) (retErr error) {
if f.changeLogWriter != nil {
r := changelog.Record{
TS: time.Now(),
Action: "TruncStart",
FName: f.rawName,
Off: size,
}
f.changeLogWriter.Encode(r)
defer func() {
r := changelog.Record{
TS: time.Now(),
Action: "TruncComplete",
FName: f.rawName,
RetError: retErr,
}
f.changeLogWriter.Encode(r)
}()
}
meta, err := f.currentMeta()
if err != nil {
return err
}
if size >= meta.FileSize {
return nil
}
if f.sectorWriter == nil {
f.sectorWriter = &SectorWriter{
F: f,
meta: meta,
}
}
firstSectorIdx := f.sectorIdxForPos(size)
firstSectorIdxToDelete := firstSectorIdx
if size%f.sectorSize != 0 {
firstSectorIdxToDelete++
sectors, err := f.getSectors([]string{meta.Sectors[firstSectorIdx]})
if err != nil {
return err
}
sectors[0].Data = sectors[0].Data[:size%f.sectorSize]
f.sectorWriter.WriteSector(firstSectorIdx, sectors[0].Data)
}
lastSectorIdx := len(meta.Sectors) - 1
for sectToDelete := firstSectorIdxToDelete; sectToDelete <= lastSectorIdx; sectToDelete++ {
f.sectorWriter.DeleteSector(meta.Sectors[sectToDelete])
}
meta.FileSize = size
return nil
}
// sectorForPos returns the array index into the metadata
// sectors slice
func (f *File) sectorIdxForPos(pos int64) int {
return int(pos / f.sectorSize)
}
func (f *File) Sync(flag sqlite3vfs.SyncType) error {
if f.changeLogWriter != nil {
r := changelog.Record{
TS: time.Now(),
Action: "SyncStart",
FName: f.rawName,
}
f.changeLogWriter.Encode(r)
defer func() {
r := changelog.Record{
TS: time.Now(),
Action: "SyncComplete",
FName: f.rawName,
}
f.changeLogWriter.Encode(r)
}()
}
if f.sectorWriter != nil {
err := f.sectorWriter.Flush()
if err != nil {
return err
}
f.sectorWriter = nil
}
return nil
}
func (f *File) currentMeta() (*dynamo.FileMetaV1V2, error) {
if f.sectorWriter != nil {
return f.sectorWriter.meta, nil
}
t0 := time.Now()
existing, err := f.db.GetItem(&dynamodb.GetItemInput{
TableName: &f.table,
ProjectionExpression: aws.String("#fname"),
ExpressionAttributeNames: map[string]*string{
"#fname": aws.String(f.rawName),
},
Key: map[string]*dynamodb.AttributeValue{
dynamo.HKey: {
S: aws.String(dynamo.FileMetaKey),
},
dynamo.RKey: {
N: aws.String("0"),
},
},
})
if err != nil {
return nil, err
}
GetItemHist.Observe(float64(time.Since(t0).Seconds()))
var meta dynamo.FileMetaV1V2
item := existing.Item[f.rawName]
if item == nil {
return nil, fmt.Errorf("file metadata not found for %q", f.rawName)
}
err = json.Unmarshal([]byte(*item.S), &meta)
if err != nil {
return nil, fmt.Errorf("decode file metadata err: %w", err)
}
return &meta, nil
}
func (f *File) FileSize() (retSize int64, retErr error) {
if f.changeLogWriter != nil {
r := changelog.Record{
TS: time.Now(),
Action: "FileSizeStart",
FName: f.rawName,
}
f.changeLogWriter.Encode(r)
defer func() {
r := changelog.Record{
TS: time.Now(),
Action: "FileSizeComplete",
FName: f.rawName,
RetCount: int(retSize),
RetError: retErr,
}
f.changeLogWriter.Encode(r)
}()
}
meta, err := f.currentMeta()
if err != nil {
return 0, err
}
size := meta.FileSize
if size > f.cachedSize {
f.cachedSize = size
} else if size < f.cachedSize {
log.Printf("filesize smaller than cache: real=%d cache=%d", size, f.cachedSize)
}
return size, nil
}
func (f *File) Lock(elock sqlite3vfs.LockType) (retErr error) {
// UNLOCKED -> SHARED
// SHARED -> RESERVED
// SHARED -> (PENDING) -> EXCLUSIVE
// RESERVED -> (PENDING) -> EXCLUSIVE
// PENDING -> EXCLUSIVE
if f.changeLogWriter != nil {
r := changelog.Record{
TS: time.Now(),
Action: "LockStart",
FName: f.rawName,
ArgFlags: int(elock),
}
f.changeLogWriter.Encode(r)
defer func() {
r := changelog.Record{
TS: time.Now(),
Action: "LockComplete",
FName: f.rawName,
RetError: retErr,
}
f.changeLogWriter.Encode(r)
}()
}
curLevel := f.lockManager.Level()
if elock <= curLevel {
return nil
}
// (1) We never move from unlocked to anything higher than shared lock.
if curLevel == sqlite3vfs.LockNone && elock > sqlite3vfs.LockShared {
return errors.New("invalid lock transition requested")
}
// (2) SQLite never explicitly requests a pendig lock.
if elock == sqlite3vfs.LockPending {
return errors.New("invalid Lock() request for state pending")
}
// (3) A shared lock is always held when a reserve lock is requested.
if elock == sqlite3vfs.LockReserved && curLevel != sqlite3vfs.LockShared {
return errors.New("can only transition to Reserved lock from Shared lock")
}
return f.lockManager.Lock(elock)
}
func (f *File) Unlock(elock sqlite3vfs.LockType) (retErr error) {
if f.changeLogWriter != nil {
r := changelog.Record{
TS: time.Now(),
Action: "UnlockStart",
FName: f.rawName,
ArgFlags: int(elock),
}
f.changeLogWriter.Encode(r)
defer func() {
r := changelog.Record{
TS: time.Now(),
Action: "UnlockComplete",
FName: f.rawName,
RetError: retErr,
}
f.changeLogWriter.Encode(r)
}()
}
return f.lockManager.Unlock(elock)
}
func (f *File) CheckReservedLock() (retB bool, retErr error) {
if f.changeLogWriter != nil {
r := changelog.Record{
TS: time.Now(),
Action: "CheckReservedLockStart",
FName: f.rawName,
}
f.changeLogWriter.Encode(r)
defer func() {
c := 0
if retB {
c = 1
}
r := changelog.Record{
TS: time.Now(),
Action: "CheckReservedLockComplete",
FName: f.rawName,
RetCount: c,
RetError: retErr,
}
f.changeLogWriter.Encode(r)
}()
}
return f.lockManager.CheckReservedLock()
}
func (f *File) SectorSize() int64 {
return f.sectorSize
}
func (f *File) DeviceCharacteristics() sqlite3vfs.DeviceCharacteristic {
c := sqlite3vfs.IocapSafeAppend | sqlite3vfs.IocapSequential
switch f.sectorSize {
case 1 << 9:
c |= sqlite3vfs.IocapAtomic512
case 1 << 10:
c |= sqlite3vfs.IocapAtomic1K
case 1 << 11:
c |= sqlite3vfs.IocapAtomic2K
case 1 << 12:
c |= sqlite3vfs.IocapAtomic4K
case 1 << 13:
c |= sqlite3vfs.IocapAtomic8K
case 1 << 14:
c |= sqlite3vfs.IocapAtomic16K
case 1 << 15:
c |= sqlite3vfs.IocapAtomic32K
case 1 << 16:
c |= sqlite3vfs.IocapAtomic64K
}
return c
}
func (f *File) updateMeta(meta *dynamo.FileMetaV1V2) error {
metaBytes, err := json.Marshal(meta)
if err != nil {
return err
}
t0 := time.Now()
_, err = f.db.UpdateItem(&dynamodb.UpdateItemInput{
TableName: &f.table,
UpdateExpression: aws.String("SET #fname=:meta"),
Key: map[string]*dynamodb.AttributeValue{
dynamo.HKey: {
S: aws.String(dynamo.FileMetaKey),
},
dynamo.RKey: {
N: aws.String("0"),
},
},
ExpressionAttributeNames: map[string]*string{
"#fname": &meta.OrigName,
},
ExpressionAttributeValues: map[string]*dynamodb.AttributeValue{
":meta": {
S: aws.String(string(metaBytes)),
},
},
})
UpdateItemHist.Observe(time.Since(t0).Seconds())
return err
}
func (f *File) CleanupSectors(meta *dynamo.FileMetaV1V2) error {
secWriter := &SectorWriter{
F: f,
meta: meta,
skipMetadataUpdates: true,
}
for _, sect := range meta.Sectors {
secWriter.DeleteSector(sect)
}
return secWriter.Flush()
}