Merge pull request #11 from luispedro/find_output

RFCT Remove duplication of `output.md`
BigDataBiology · Jun 12, 2020 · 797caa1 · 797caa1
2 parents 9024c4b + 5eec98a
commit 797caa1
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Showing 3 changed files with 9 additions and 54 deletions.
diff --git a/.gitignore b/.gitignore
@@ -2,3 +2,4 @@ __pycache__/
 Genome2gmgc.egg-info/
 build/
 dist/
+gmgc_finder/output.md
diff --git a/gmgc_finder/output.md b/gmgc_finder/output.md
diff --git a/setup.py b/setup.py
@@ -1,3 +1,4 @@
+from os import path
 from setuptools import setup,find_packages
 
 exec(compile(open('gmgc_finder/gmgc_finder_version.py').read(),
@@ -9,6 +10,13 @@
 except:
     long_description = open('README.md').read()
 
+
+# A bit hacky, but we want to have the output.md file in the package directory
+# so it can be found by the setuptools machinery
+if not path.exists('gmgc_finder/output.md'):
+    from shutil import copyfile
+    copyfile('docs/output.md', 'gmgc_finder/output.md')
+
 setup(name='GMGC-Finder',
       version=__version__,
       description='Map genes and genome to the Global Microbial Gene Catalog (GMGC)',