RFCT Use a link for output.md

This is more robust than the previous solution where docs/output.md could easily get out of sync with gmgc_finder/output.md
BigDataBiology · Jun 14, 2020 · e70c508 · e70c508
1 parent 997118d
commit e70c508
Show file tree

Hide file tree

Showing 3 changed files with 1 addition and 7 deletions.
diff --git a/.gitignore b/.gitignore
@@ -2,4 +2,3 @@ __pycache__/
 Genome2gmgc.egg-info/
 build/
 dist/
-gmgc_finder/output.md
diff --git a/gmgc_finder/output.md b/gmgc_finder/output.md
@@ -0,0 +1 @@
+../docs/output.md
diff --git a/setup.py b/setup.py
@@ -11,12 +11,6 @@
     long_description = open('README.md').read()
 
 
-# A bit hacky, but we want to have the output.md file in the package directory
-# so it can be found by the setuptools machinery
-if not path.exists('gmgc_finder/output.md'):
-    from shutil import copyfile
-    copyfile('docs/output.md', 'gmgc_finder/output.md')
-
 setup(name='GMGC-Finder',
       version=__version__,
       description='Map genes and genome to the Global Microbial Gene Catalog (GMGC)',