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NEWS.md

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Version 0.5-0, May 21, 2024

  • Updated documentation.
  • Adding SQPAD approach.

Version 0.4-6, March 8, 2023

  • CRAN alert fixed: internal update.formula.svisit renamed to update_formula_svisit (#9).
  • Maintainer email changed to personal email.

Version 0.4-5, November 7, 2022

  • Documentation updates (#8).

Version 0.4-4, August 12, 2020

  • Using fully specified URLs in DESCRIPTION as per CRAN request.

Version 0.4-3, August 11, 2020

  • Namespace issue fixed for scocc.fit and extractMLE (#6).
  • Adding na.rm=TRUE to cmulti to avoid issues with optimize interval.

Version 0.4-2, August 29, 2018

  • Updated documentation, references.

Version 0.4-1, January 30, 2018

  • Denes et al. 2017 paper added to documentation.
  • inst/ChangeLog is removed and replaced by NEWS.md.
  • cmulti models now have a predict method, see examples.
  • "fmix"" model type with time varying rates added to cmulti models.

Version 0.4-0, March 2, 2016

  • load_BAM_QPAD function is deprecated (migrated to QPAD package).
  • hbootindex bugfix: sample() behaviour when length(x) == 1 is recognized when resampling from a length 1 vector.
  • pbapply package is now a dependency.
  • Various minor fixes to satisfy R-devel checks.
  • Negative Binomial option added to svabu.
  • cmulti returns correct nobs (nonzero total counts).

Version 0.3-2, May 15, 2014

  • Bugfix in cmulti2.fit: n was undefined (reported by Julie Hart).
  • Bugfix in hbootindex: n was not set when strata was missing.
  • Documentation fixes (comma separated lists of variable names inside \code).

Version 0.3-1, Sept 25, 2013

  • hbootindex: routine improved, now uses weights proportional to groups sizes.
  • Cleanup to satisfy R 3.0.2 check: remove :::.
  • Bugfix: svocc returned k=1 object irrespective of the n.clones option settings for MLE with method = "dc".
  • Help page added for internal objects (e.g. cmulti.fit0).
  • drop.scope.svisit is no longer treated as a method because drop.scope is not a generic.

Version 0.3-0, July 29, 2013

  • jags.engine removed, replaced by dcmle dependency.
  • dFormula and checkDesign added with Formula dependency, this will replace the old svisitFormula interface to allow handling of more complex designs.
  • logdmultinom: simplified version of dmultinom.
  • bymethod: collapses (pools) observations by methodology.
  • cmulti: new function for conditional multinomial estimation.
  • load_BAM_QPAD: new function to load BAM QPAD parameter estimates and support functions.
  • hbootindex: new function to sample indices with replacement for grouped/stratified data.
  • fitted.cmulti added: get estimated singing rate or distance model parameter (not available for type = "mix")
  • predict methods: response (lhs) is dropped from formula when newdata is provided.

Version 0.2-2, May 2, 2012

  • inst/COPYING file removed (standard license).

Version 0.2-1, November 25, 2011

  • Help pages edited.

Version 0.2-0, October 18, 2011

  • svabu and related functions added.
  • summary: nobs was returned as NULL, so AIC was not printed. Now fixed.
  • R (>= 2.13.0) added to DESCRIPTION (reported by Uwe Ligges).

Version 0.1-0, September 27, 2011

  • First public release on CRAN.