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postfiltering.sh
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postfiltering.sh
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#!/bin/bash
# Copyright (C) 2014-2015 Nicola Lazzarini
# School of Computing Science, Newcastle University
# This file is part of the Functional Networks Learning (FuNeL) co-prediction protocol.
# FuNeL is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 3 of the License, or
# (at your option) any later version.
# FunNeL is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details:
# http://www.gnu.org/licenses/gpl.html
########################################################################
# Applies a post filter to map each probe with its relative gene. #
# It requires a 2 columns text mapping file: probe_id gene_id #
########################################################################
if [ $# -lt 2 ]; then
echo "Wrong number of parameters"
echo "Correct use: ./postfiltering.sh <project_name> <mapping>"
exit
fi
python scripts/postfiltering.py $1 $2
rm projects/$1/tmp.txt