/
test_import.py
167 lines (150 loc) · 7.07 KB
/
test_import.py
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import os
import unittest
from pyiron_base import Project
from pyiron_base.project.archiving.import_archive import getdir, extract_archive
from pandas._testing import assert_frame_equal
from filecmp import dircmp
from shutil import rmtree
from pyiron_base._tests import PyironTestCase, ToyJob
class TestUnpacking(PyironTestCase):
@classmethod
def setUpClass(cls):
super().setUpClass()
# this is used to create a folder/a compressed file, are not path
cls.arch_dir = 'archive_folder'
# this is used to create a folder/a compressed file, are not path
cls.arch_dir_comp = cls.arch_dir+'_comp'
cls.pr = Project('test')
cls.pr.remove_jobs(recursive=True, silently=True)
cls.job = cls.pr.create_job(job_type=ToyJob, job_name="toy")
cls.job.run()
cls.pr.pack(destination_path=cls.arch_dir_comp, compress=True)
cls.file_location = os.path.dirname(os.path.abspath(__file__)).replace(
"\\", "/"
)
cls.imp_pr = Project('imported')
@classmethod
def tearDownClass(cls) -> None:
super().tearDownClass()
cls.pr.remove(enable=True)
uncompressed_pr = Project(cls.arch_dir)
uncompressed_pr.remove(enable=True, enforce=True)
os.remove('export.csv')
os.remove(cls.arch_dir_comp + ".tar.gz")
cls.imp_pr.remove(enable=True)
def setUp(self):
super().setUp()
self.imp_pr.remove_jobs(recursive=True, silently=True)
self.imp_pr.unpack(origin_path=self.arch_dir_comp, compress=True)
def tearDown(self):
super().tearDown()
self.imp_pr.remove_jobs(recursive=True, silently=True)
def test_import_csv(self):
df_original = self.pr.job_table()
df_import = self.imp_pr.job_table()
df_import.dropna(inplace=True, axis=1)
df_original.dropna(inplace=True, axis=1)
df_import.drop('project', inplace=True, axis=1)
df_original.drop('project', inplace=True, axis=1)
df_import.drop('id', inplace=True, axis=1)
df_original.drop('id', inplace=True, axis=1)
df_import["hamversion"] = float(df_import["hamversion"])
df_original["hamversion"] = float(df_original["hamversion"])
assert_frame_equal(df_original, df_import)
def test_import_compressed(self):
path_original = self.pr.path
path_import = self.imp_pr.path
path_original = getdir(path_original)
path_import = getdir(path_import)
compare_obj = dircmp(path_original, path_import)
self.assertEqual(len(compare_obj.diff_files), 0)
def test_unpack_to_nested_project(self):
pr = self.pr.open("nested")
pr_imp = pr.open("imported")
pr_imp.unpack(origin_path=self.arch_dir_comp, compress=True)
path_original = self.pr.path
path_import = pr_imp.path
path_original = getdir(path_original)
path_import = getdir(path_import)
compare_obj = dircmp(path_original, path_import)
self.assertEqual(len(compare_obj.diff_files), 0)
pr.remove(enable=True)
def test_unpack_from_other_dir_uncompress(self):
cwd = os.getcwd()
pack_path = os.path.join(cwd, 'exported')
os.makedirs(name=pack_path)
pack_path_comp = os.path.join(pack_path, self.arch_dir_comp)
pack_path_csv = os.path.join(pack_path, 'export.csv')
self.pr.pack(destination_path=pack_path_comp, csv_file_name=pack_path_csv, compress=False)
pr = self.pr.open("nested")
pr_imp = pr.open("imported")
pr_imp.unpack(origin_path=pack_path_comp, csv_file_name=pack_path_csv, compress=False)
compare_obj = dircmp(pack_path_comp, pr_imp.path)
self.assertEqual(len(compare_obj.diff_files), 0)
try:
rmtree(pack_path)
except Exception as err_msg:
print(f"deleting unsuccessful: {err_msg}")
def test_import_uncompress(self):
self.pr.pack(destination_path=self.arch_dir, compress=False)
self.imp_pr.remove_jobs(recursive=True, silently=True)
self.imp_pr.unpack(origin_path=self.arch_dir, compress=False)
path_original = self.pr.path
path_import = self.imp_pr.path
path_original = getdir(path_original)
path_import = getdir(path_import)
compare_obj = dircmp(path_original, path_import)
self.assertEqual(len(compare_obj.diff_files), 0)
def test_import_from_proj(self):
self.pr.pack(destination_path=self.arch_dir, compress=False)
self.imp_pr.remove_jobs(recursive=True, silently=True)
aux_proj = Project(self.arch_dir) # an auxilary project
aux_proj.open(os.curdir)
self.imp_pr.unpack(aux_proj, compress=False)
path_original = self.pr.path
path_import = self.imp_pr.path
path_original = getdir(path_original)
path_import = getdir(path_import)
compare_obj = dircmp(path_original, path_import)
self.assertEqual(len(compare_obj.diff_files), 0)
def test_load_job(self):
"""Jobs should be able to load from the imported project."""
self.imp_pr.remove_jobs(recursive=True, silently=True)
self.pr.pack(destination_path=self.arch_dir_comp, compress=True)
self.imp_pr.unpack(origin_path=self.arch_dir_comp, compress=True)
try:
j = self.imp_pr.load(self.job.name)
except Exception as e:
self.fail(msg="Loading job fails with {}".format(str(e)))
def test_check_job_parameters(self):
"""Imported jobs should be equal to their originals in all their parameters."""
self.imp_pr.remove_jobs(recursive=True, silently=True)
self.pr.pack(destination_path=self.arch_dir_comp, compress=True)
self.imp_pr.unpack(origin_path=self.arch_dir_comp, compress=True)
j = self.imp_pr.load(self.job.name)
self.assertEqual(self.job.input["data_in"], j.input["data_in"],
"Input values not properly copied to imported job.")
self.assertEqual(self.job["data_out"], j["data_out"],
"Output values not properly copied to imported job.")
def test_import_with_targz_extension(self):
cwd = os.getcwd()
pack_path = os.path.join(cwd, 'exported_withTar')
os.makedirs(name=pack_path)
tar_arch = self.arch_dir_comp + '.tar.gz'
pack_path_comp = os.path.join(pack_path, tar_arch)
pack_path_csv = os.path.join(pack_path, 'export.csv')
self.pr.pack(destination_path=pack_path_comp, csv_file_name=pack_path_csv, compress=True)
pr = self.pr.open("nested2")
pr_imp = pr.open("imported2")
pr_imp.unpack(origin_path=pack_path_comp, csv_file_name=pack_path_csv, compress=True)
# here the 7 is the length of '.tar.gz' string
extract_archive(pack_path_comp[:-7])
compare_obj = dircmp(pack_path_comp[:-7], pr_imp.path)
self.assertEqual(len(compare_obj.diff_files), 0)
pr.remove(enable=True)
try:
rmtree(pack_path)
except Exception as err_msg:
print(f"deleting unsuccessful: {err_msg}")
if __name__ == "__main__":
unittest.main()