ImportError: cannot import name 'np' from 'libpysal.common'

[wsqstar]

Platform information:

Last updated: 2024-02-05T17:05:56.848677+08:00

Python implementation: CPython
Python version : 3.12.0
IPython version : 8.21.0

Compiler : GCC 11.2.0
OS : Linux
Release : 5.15.133.1-microsoft-standard-WSL2
Machine : x86_64
Processor : x86_64
CPU cores : 12
Architecture: 64bit

• SciPy version:1.11.4
• NumPy version:1.26.3

When following the https://pysal.org/spopt/notebooks/p-median.html
I tried：

import geopandas
import matplotlib.pyplot as plt
from matplotlib.patches import Patch
import matplotlib.lines as mlines
import numpy
import pulp
import shapely
import spopt
from spopt.locate import PMedian, simulated_geo_points

import warnings
with warnings.catch_warnings():
    warnings.simplefilter("ignore")
    # ignore deprecation warning - GH pysal/spaghetti#649
    import spaghetti

%watermark -w
%watermark -iv

However：

---

ImportError Traceback (most recent call last)
Cell In[7], line 15
13 warnings.simplefilter("ignore")
14 # ignore deprecation warning - GH pysal/spaghetti#649
---> 15 import spaghetti
17 get_ipython().run_line_magic('watermark', '-w')
18 get_ipython().run_line_magic('watermark', '-iv')

File ~/miniconda3/envs/py312/lib/python3.12/site-packages/spaghetti/init.py:7
1 version = "1.6.2"
3 """
4 # spaghetti --- Spatial Graphs: Networks, Topology, & Inference
5 """
----> 7 from .network import Network, PointPattern, SimulatedPointPattern
8 from .network import extract_component, spanning_tree
9 from .network import element_as_gdf, regular_lattice

File ~/miniconda3/envs/py312/lib/python3.12/site-packages/spaghetti/network.py:5
2 from itertools import islice
3 import copy, os, pickle, warnings
----> 5 import esda
6 import numpy
8 from .analysis import GlobalAutoK

File ~/miniconda3/envs/py312/lib/python3.12/site-packages/esda/init.py:12
10 from .geary_local import Geary_Local
11 from .geary_local_mv import Geary_Local_MV
---> 12 from .getisord import G, G_Local
13 from .join_counts import Join_Counts
14 from .join_counts_local import Join_Counts_Local

File ~/miniconda3/envs/py312/lib/python3.12/site-packages/esda/getisord.py:8
5 all = ["G", "G_Local"]
7 import warnings
----> 8 from libpysal.common import np, stats
9 from libpysal.weights.spatial_lag import lag_spatial as slag
10 from libpysal.weights.util import fill_diagonal

ImportError: cannot import name 'np' from 'libpysal.common' (/home/myubuntu/miniconda3/envs/py312/lib/python3.12/site-packages/libpysal/common.py)

[martinfleis]

Please update esda to v2.5.1 which resolved this issue.