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Using Greengenes2 in Qiita #3394

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wasade opened this issue Apr 17, 2024 · 2 comments
Open

Using Greengenes2 in Qiita #3394

wasade opened this issue Apr 17, 2024 · 2 comments

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@wasade
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wasade commented Apr 17, 2024

I searched the help documents for how to use Greengenes2 in Qiita, and did not observe documentation. It's currently not obvious what a user needs to do to use Greengenes2 in Qiita, would it be possible to get help information together?
@antgonza
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Is there anything in the GG2 website that would fit here? I can easily add it or point it from qiita's processing recommendations.

@wasade
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wasade commented Apr 17, 2024

I think what is missing in Qiita's documentation is what steps are necessary within Qiita to use Greengenes2. It would be really nice to show an example of combining 16S/WGS data and generating a weighted UniFrac plot like was done in the manuscript

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@wasade @antgonza