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qgrid not working in Binder notebook #374

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CarlosGrohmann opened this issue Mar 13, 2022 · 0 comments
Open

qgrid not working in Binder notebook #374

CarlosGrohmann opened this issue Mar 13, 2022 · 0 comments

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@CarlosGrohmann
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Hello,

I'm trying to get qgrid to work on a jupyter python notebook that I need to share with some colleagues. I'm new to bynder, and tried to follow some examples, but maybe some things have changed. I always end up with the Error displaying widget: model not found message.

The repo is located at https://github.com/CarlosGrohmann/DEMIX_wine_contest

the bynder is this one: https://mybinder.org/v2/gh/CarlosGrohmann/DEMIX_wine_contest/HEAD?labpath=wine_contest.ipynb

This is my environment.yml:

name: demix-env
channels:
  - conda-forge
  - defaults
dependencies:
  - jupyterlab
  - python
  - numpy
  - qgrid
  - matplotlib
  - nodejs
  - pip
  - pip:
    - npm
    - ipywidgets
    - pandas
    - seaborn
    - qgrid
    - scipy
    - jupyter_contrib_nbextensions 

and this is postBuild

#!/bin/bash
jupyter labextension install @ jupyter-widgets / jupyterlab-manager --no-build
jupyter labextension install @ 8080labs / qgrid --no-build

jupyter nbextension enable --py --sys-prefix qgrid
jupyter nbextension enable --py --sys-prefix widgetsnbextension

jupyter lab build --minimize=False

Python packages:

# packages in environment at /srv/conda/envs/notebook:
#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                 conda_forge    conda-forge
_openmp_mutex             4.5                       1_gnu    conda-forge
alembic                   1.7.5              pyhd8ed1ab_0    conda-forge
alsa-lib                  1.2.3                h516909a_0    conda-forge
anyio                     3.5.0           py310hff52083_0    conda-forge
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0          py310h6acc77f_1    conda-forge
asttokens                 2.0.5              pyhd8ed1ab_0    conda-forge
async_generator           1.10                       py_0    conda-forge
attrs                     21.4.0             pyhd8ed1ab_0    conda-forge
babel                     2.9.1              pyh44b312d_0    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                        py_2    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.10.0             pyha770c72_0    conda-forge
bleach                    4.1.0              pyhd8ed1ab_0    conda-forge
blinker                   1.4                        py_1    conda-forge
brotli                    1.0.9                h7f98852_6    conda-forge
brotli-bin                1.0.9                h7f98852_6    conda-forge
brotlipy                  0.7.0           py310h6acc77f_1003    conda-forge
bzip2                     1.0.8                h7f98852_4    conda-forge
c-ares                    1.18.1               h7f98852_0    conda-forge
ca-certificates           2021.10.8            ha878542_0    conda-forge
certifi                   2021.10.8       py310hff52083_1    conda-forge
certipy                   0.1.3                      py_0    conda-forge
cffi                      1.15.0          py310h0fdd8cc_0    conda-forge
charset-normalizer        2.0.10             pyhd8ed1ab_0    conda-forge
cryptography              36.0.1          py310h685ca39_0    conda-forge
cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
dbus                      1.13.6               h5008d03_3    conda-forge
debugpy                   1.5.1           py310h122e73d_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
entrypoints               0.3             pyhd8ed1ab_1003    conda-forge
executing                 0.8.3              pyhd8ed1ab_0    conda-forge
expat                     2.4.7                h27087fc_0    conda-forge
flit-core                 3.6.0              pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.13.96              h8e229c2_2    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
fonttools                 4.30.0          py310h5764c6d_0    conda-forge
freetype                  2.10.4               h0708190_1    conda-forge
gettext                   0.19.8.1          h73d1719_1008    conda-forge
giflib                    5.2.1                h36c2ea0_2    conda-forge
greenlet                  1.1.2           py310h122e73d_1    conda-forge
gst-plugins-base          1.18.5               hf529b03_3    conda-forge
gstreamer                 1.18.5               h9f60fe5_3    conda-forge
icu                       69.1                 h9c3ff4c_0    conda-forge
idna                      3.3                pyhd8ed1ab_0    conda-forge
importlib-metadata        4.11.2          py310hff52083_0    conda-forge
importlib_resources       5.4.0              pyhd8ed1ab_0    conda-forge
ipykernel                 6.9.1           py310hfdc917e_0    conda-forge
ipython                   8.1.1           py310hff52083_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                7.6.5              pyhd8ed1ab_0    conda-forge
jbig                      2.1               h7f98852_2003    conda-forge
jedi                      0.18.1          py310hff52083_0    conda-forge
jinja2                    3.0.3              pyhd8ed1ab_0    conda-forge
jpeg                      9e                   h7f98852_0    conda-forge
json5                     0.9.5              pyh9f0ad1d_0    conda-forge
jsonschema                4.4.0              pyhd8ed1ab_0    conda-forge
jupyter-contrib-core      0.3.3                    pypi_0    pypi
jupyter-contrib-nbextensions 0.5.1                    pypi_0    pypi
jupyter-highlight-selected-word 0.2.0                    pypi_0    pypi
jupyter-latex-envs        1.4.6                    pypi_0    pypi
jupyter-nbextensions-configurator 0.4.1                    pypi_0    pypi
jupyter-offlinenotebook   0.2.2              pyh1d7be83_0    conda-forge
jupyter-resource-usage    0.6.1              pyhd8ed1ab_0    conda-forge
jupyter_client            7.1.2              pyhd8ed1ab_0    conda-forge
jupyter_core              4.9.2           py310hff52083_0    conda-forge
jupyter_server            1.13.4             pyhd8ed1ab_0    conda-forge
jupyter_telemetry         0.1.0              pyhd8ed1ab_1    conda-forge
jupyterhub-base           2.2.1              pyhd8ed1ab_0    conda-forge
jupyterhub-singleuser     2.2.1                hd8ed1ab_0    conda-forge
jupyterlab                3.3.1              pyhd8ed1ab_0    conda-forge
jupyterlab_pygments       0.1.2              pyh9f0ad1d_0    conda-forge
jupyterlab_server         2.10.3             pyhd8ed1ab_0    conda-forge
jupyterlab_widgets        1.0.2              pyhd8ed1ab_0    conda-forge
kiwisolver                1.3.2           py310h91b1402_1    conda-forge
krb5                      1.19.2               hcc1bbae_3    conda-forge
lcms2                     2.12                 hddcbb42_0    conda-forge
ld_impl_linux-64          2.36.1               hea4e1c9_2    conda-forge
lerc                      3.0                  h9c3ff4c_0    conda-forge
libblas                   3.9.0           13_linux64_openblas    conda-forge
libbrotlicommon           1.0.9                h7f98852_6    conda-forge
libbrotlidec              1.0.9                h7f98852_6    conda-forge
libbrotlienc              1.0.9                h7f98852_6    conda-forge
libcblas                  3.9.0           13_linux64_openblas    conda-forge
libclang                  13.0.1          default_hc23dcda_0    conda-forge
libcurl                   7.81.0               h2574ce0_0    conda-forge
libdeflate                1.10                 h7f98852_0    conda-forge
libedit                   3.1.20191231         he28a2e2_2    conda-forge
libev                     4.33                 h516909a_1    conda-forge
libevent                  2.1.10               h9b69904_4    conda-forge
libffi                    3.4.2                h7f98852_5    conda-forge
libgcc-ng                 11.2.0              h1d223b6_12    conda-forge
libgfortran-ng            11.2.0              h69a702a_13    conda-forge
libgfortran5              11.2.0              h5c6108e_13    conda-forge
libglib                   2.70.2               h174f98d_4    conda-forge
libgomp                   11.2.0              h1d223b6_12    conda-forge
libiconv                  1.16                 h516909a_0    conda-forge
liblapack                 3.9.0           13_linux64_openblas    conda-forge
libllvm13                 13.0.1               hf817b99_2    conda-forge
libnghttp2                1.43.0               h812cca2_1    conda-forge
libnsl                    2.0.0                h7f98852_0    conda-forge
libogg                    1.3.4                h7f98852_1    conda-forge
libopenblas               0.3.18          pthreads_h8fe5266_0    conda-forge
libopus                   1.3.1                h7f98852_1    conda-forge
libpng                    1.6.37               h21135ba_2    conda-forge
libpq                     14.2                 hd57d9b9_0    conda-forge
libsodium                 1.0.18               h36c2ea0_1    conda-forge
libssh2                   1.10.0               ha56f1ee_2    conda-forge
libstdcxx-ng              11.2.0              he4da1e4_12    conda-forge
libtiff                   4.3.0                h542a066_3    conda-forge
libuuid                   2.32.1            h7f98852_1000    conda-forge
libuv                     1.43.0               h7f98852_0    conda-forge
libvorbis                 1.3.7                h9c3ff4c_0    conda-forge
libwebp                   1.2.2                h3452ae3_0    conda-forge
libwebp-base              1.2.2                h7f98852_1    conda-forge
libxcb                    1.13              h7f98852_1004    conda-forge
libxkbcommon              1.0.3                he3ba5ed_0    conda-forge
libxml2                   2.9.12               h885dcf4_1    conda-forge
libzlib                   1.2.11            h36c2ea0_1013    conda-forge
lxml                      4.8.0                    pypi_0    pypi
lz4-c                     1.9.3                h9c3ff4c_1    conda-forge
mako                      1.1.6              pyhd8ed1ab_0    conda-forge
markupsafe                2.1.0           py310h5764c6d_1    conda-forge
matplotlib                3.5.1           py310hff52083_0    conda-forge
matplotlib-base           3.5.1           py310h23f4a51_0    conda-forge
matplotlib-inline         0.1.3              pyhd8ed1ab_0    conda-forge
mistune                   0.8.4           py310h6acc77f_1005    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
mysql-common              8.0.28               ha770c72_0    conda-forge
mysql-libs                8.0.28               hfa10184_0    conda-forge
nbclassic                 0.3.5              pyhd8ed1ab_0    conda-forge
nbclient                  0.5.10             pyhd8ed1ab_1    conda-forge
nbconvert                 6.4.4           py310hff52083_0    conda-forge
nbformat                  5.1.3              pyhd8ed1ab_0    conda-forge
ncurses                   6.3                  h9c3ff4c_0    conda-forge
nest-asyncio              1.5.4              pyhd8ed1ab_0    conda-forge
nodejs                    17.4.0               h8ca31f7_0    conda-forge
notebook                  6.3.0              pyha770c72_1    conda-forge
npm                       0.1.1                    pypi_0    pypi
nspr                      4.32                 h9c3ff4c_1    conda-forge
nss                       3.74                 hb5efdd6_0    conda-forge
nteract_on_jupyter        2.1.3                      py_0    conda-forge
numpy                     1.22.3          py310h45f3432_0    conda-forge
oauthlib                  3.1.1              pyhd8ed1ab_0    conda-forge
openjpeg                  2.4.0                hb52868f_1    conda-forge
openssl                   1.1.1l               h7f98852_0    conda-forge
optional-django           0.1.0                    pypi_0    pypi
packaging                 21.3               pyhd8ed1ab_0    conda-forge
pamela                    1.0.0                      py_0    conda-forge
pandas                    1.4.1           py310hb5077e9_0    conda-forge
pandoc                    2.17.0.1             h7f98852_0    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
pcre                      8.45                 h9c3ff4c_0    conda-forge
pexpect                   4.8.0              pyh9f0ad1d_2    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    9.0.1           py310he619898_2    conda-forge
pip                       22.0.4             pyhd8ed1ab_0    conda-forge
prometheus_client         0.13.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.24             pyha770c72_0    conda-forge
psutil                    5.9.0           py310h6acc77f_0    conda-forge
pthread-stubs             0.4               h36c2ea0_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pycurl                    7.44.1          py310ha6c063c_1    conda-forge
pygments                  2.11.2             pyhd8ed1ab_0    conda-forge
pyjwt                     2.3.0              pyhd8ed1ab_1    conda-forge
pyopenssl                 21.0.0             pyhd8ed1ab_0    conda-forge
pyparsing                 3.0.7              pyhd8ed1ab_0    conda-forge
pyqt                      5.12.3          py310hff52083_8    conda-forge
pyqt-impl                 5.12.3          py310h1f8e252_8    conda-forge
pyqt5-sip                 4.19.18         py310h122e73d_8    conda-forge
pyqtchart                 5.12            py310hfcd6d55_8    conda-forge
pyqtwebengine             5.12.1          py310hfcd6d55_8    conda-forge
pyrsistent                0.18.1          py310h6acc77f_0    conda-forge
pysocks                   1.7.1           py310hff52083_4    conda-forge
python                    3.10.2          h85951f9_4_cpython    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-json-logger        2.0.1              pyh9f0ad1d_0    conda-forge
python_abi                3.10                    2_cp310    conda-forge
pytz                      2021.3             pyhd8ed1ab_0    conda-forge
pyyaml                    6.0                      pypi_0    pypi
pyzmq                     22.3.0          py310h675a958_1    conda-forge
qgrid                     1.3.1              pyhd8ed1ab_3    conda-forge
qt                        5.12.9               ha98a1a1_5    conda-forge
readline                  8.1                  h46c0cb4_0    conda-forge
requests                  2.27.1             pyhd8ed1ab_0    conda-forge
ruamel.yaml               0.17.21         py310h6acc77f_0    conda-forge
ruamel.yaml.clib          0.2.6           py310h6acc77f_0    conda-forge
scipy                     1.8.0                    pypi_0    pypi
seaborn                   0.11.2                   pypi_0    pypi
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
setuptools                60.9.3          py310hff52083_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
sniffio                   1.2.0           py310hff52083_2    conda-forge
soupsieve                 2.3.1              pyhd8ed1ab_0    conda-forge
sqlalchemy                1.4.32          py310h5764c6d_0    conda-forge
sqlite                    3.37.0               h9cd32fc_0    conda-forge
stack_data                0.2.0              pyhd8ed1ab_0    conda-forge
terminado                 0.13.3          py310hff52083_0    conda-forge
testpath                  0.5.0              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h27826a3_0    conda-forge
tornado                   6.1             py310h6acc77f_2    conda-forge
traitlets                 5.1.1              pyhd8ed1ab_0    conda-forge
typing_extensions         4.0.1              pyha770c72_0    conda-forge
tzdata                    2021e                he74cb21_0    conda-forge
unicodedata2              14.0.0          py310h6acc77f_0    conda-forge
urllib3                   1.26.8             pyhd8ed1ab_1    conda-forge
wcwidth                   0.2.5              pyh9f0ad1d_2    conda-forge
webencodings              0.5.1                      py_1    conda-forge
websocket-client          1.2.3              pyhd8ed1ab_0    conda-forge
wheel                     0.37.1             pyhd8ed1ab_0    conda-forge
widgetsnbextension        3.5.2           py310hff52083_1    conda-forge
xorg-libxau               1.0.9                h7f98852_0    conda-forge
xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
xz                        5.2.5                h516909a_1    conda-forge
zeromq                    4.3.4                h9c3ff4c_1    conda-forge
zipp                      3.7.0              pyhd8ed1ab_0    conda-forge
zlib                      1.2.11            h36c2ea0_1013    conda-forge
zstd                      1.5.2                ha95c52a_0    conda-forge

Jupyter extensions

JupyterLab v3.3.1
/srv/conda/envs/notebook/share/jupyter/labextensions
        jupyter-offlinenotebook v0.2.2 enabled OK
        @jupyter-widgets/jupyterlab-manager v3.0.1 enabled OK (python, jupyterlab_widgets)
        @jupyter-server/resource-usage v0.6.1 enabled OK (python, jupyter-resource-usage)

Thanks

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