Failed to build torch-quiver

[decoherencer]

Hello, I tried both pip install and source install but the build fails. error log:

2022-01-16T23:31:05,187 Using pip 20.3.3 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip (python 3.8)
2022-01-16T23:31:05,188 Non-user install because site-packages writeable
2022-01-16T23:31:05,321 Ignoring indexes: https://pypi.org/simple
2022-01-16T23:31:05,321 Created temporary directory: /tmp/pip-ephem-wheel-cache-ssko_7ys
2022-01-16T23:31:05,322 Created temporary directory: /tmp/pip-req-tracker-jt_5iad6
2022-01-16T23:31:05,322 Initialized build tracking at /tmp/pip-req-tracker-jt_5iad6
2022-01-16T23:31:05,322 Created build tracker: /tmp/pip-req-tracker-jt_5iad6
2022-01-16T23:31:05,322 Entered build tracker: /tmp/pip-req-tracker-jt_5iad6
2022-01-16T23:31:05,322 Created temporary directory: /tmp/pip-install-evkuymo2
2022-01-16T23:31:05,329 Processing /home/user/torch-quiver
2022-01-16T23:31:05,329 Created temporary directory: /tmp/pip-req-build-wc0b161h
2022-01-16T23:31:05,344 Added file:///home/user/torch-quiver to build tracker '/tmp/pip-req-tracker-jt_5iad6'
2022-01-16T23:31:05,344 Running setup.py (path:/tmp/pip-req-build-wc0b161h/setup.py) egg_info for package from file:///home/user/torch-quiver
2022-01-16T23:31:05,344 Created temporary directory: /tmp/pip-pip-egg-info-qjj68kst
2022-01-16T23:31:05,344 Running command python setup.py egg_info
2022-01-16T23:31:06,279 running egg_info
2022-01-16T23:31:06,279 creating /tmp/pip-pip-egg-info-qjj68kst/torch_quiver.egg-info
2022-01-16T23:31:06,279 writing /tmp/pip-pip-egg-info-qjj68kst/torch_quiver.egg-info/PKG-INFO
2022-01-16T23:31:06,280 writing dependency_links to /tmp/pip-pip-egg-info-qjj68kst/torch_quiver.egg-info/dependency_links.txt
2022-01-16T23:31:06,280 writing top-level names to /tmp/pip-pip-egg-info-qjj68kst/torch_quiver.egg-info/top_level.txt
2022-01-16T23:31:06,280 writing manifest file '/tmp/pip-pip-egg-info-qjj68kst/torch_quiver.egg-info/SOURCES.txt'
2022-01-16T23:31:06,298 reading manifest file '/tmp/pip-pip-egg-info-qjj68kst/torch_quiver.egg-info/SOURCES.txt'
2022-01-16T23:31:06,299 reading manifest template 'MANIFEST.in'
2022-01-16T23:31:06,299 /home/user/miniconda3/envs/env/lib/python3.8/distutils/extension.py:131: UserWarning: Unknown Extension options: 'with_cuda'
2022-01-16T23:31:06,299 warnings.warn(msg)
2022-01-16T23:31:06,299 warning: no files found matching 'README'
2022-01-16T23:31:06,302 writing manifest file '/tmp/pip-pip-egg-info-qjj68kst/torch_quiver.egg-info/SOURCES.txt'
2022-01-16T23:31:06,452 Source in /tmp/pip-req-build-wc0b161h has version 0.1.0, which satisfies requirement torch-quiver==0.1.0 from file:///home/user/torch-quiver
2022-01-16T23:31:06,452 Removed torch-quiver==0.1.0 from file:///home/user/torch-quiver from build tracker '/tmp/pip-req-tracker-jt_5iad6'
2022-01-16T23:31:06,455 Created temporary directory: /tmp/pip-unpack-5yxxj95m
2022-01-16T23:31:06,456 Building wheels for collected packages: torch-quiver
2022-01-16T23:31:06,457 Created temporary directory: /tmp/pip-wheel-bmu8ll6w
2022-01-16T23:31:06,457 Destination directory: /tmp/pip-wheel-bmu8ll6w
2022-01-16T23:31:06,458 Running command /home/user/miniconda3/envs/env/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"'; file='"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-bmu8ll6w
2022-01-16T23:31:07,308 /home/user/miniconda3/envs/env/lib/python3.8/distutils/extension.py:131: UserWarning: Unknown Extension options: 'with_cuda'
2022-01-16T23:31:07,309 warnings.warn(msg)
2022-01-16T23:31:07,331 running bdist_wheel
2022-01-16T23:31:07,340 running build
2022-01-16T23:31:07,341 running build_py
2022-01-16T23:31:07,356 creating build
2022-01-16T23:31:07,356 creating build/lib.linux-x86_64-3.8
2022-01-16T23:31:07,357 creating build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:07,357 copying ./srcs/python/quiver/comm.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:07,357 copying ./srcs/python/quiver/init.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:07,357 copying ./srcs/python/quiver/shard_tensor.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:07,357 copying ./srcs/python/quiver/partition.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:07,357 copying ./srcs/python/quiver/feature.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:07,357 copying ./srcs/python/quiver/utils.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:07,357 copying ./srcs/python/quiver/async_cuda_sampler.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:07,358 creating build/lib.linux-x86_64-3.8/quiver/multiprocessing
2022-01-16T23:31:07,358 copying ./srcs/python/quiver/multiprocessing/init.py -> build/lib.linux-x86_64-3.8/quiver/multiprocessing
2022-01-16T23:31:07,358 copying ./srcs/python/quiver/multiprocessing/reductions.py -> build/lib.linux-x86_64-3.8/quiver/multiprocessing
2022-01-16T23:31:07,358 creating build/lib.linux-x86_64-3.8/quiver/pyg
2022-01-16T23:31:07,358 copying ./srcs/python/quiver/pyg/init.py -> build/lib.linux-x86_64-3.8/quiver/pyg
2022-01-16T23:31:07,358 copying ./srcs/python/quiver/pyg/sage_sampler.py -> build/lib.linux-x86_64-3.8/quiver/pyg
2022-01-16T23:31:07,358 running build_ext
2022-01-16T23:31:07,373 building 'torch_quiver' extension
2022-01-16T23:31:07,373 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8
2022-01-16T23:31:07,374 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs
2022-01-16T23:31:07,374 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp
2022-01-16T23:31:07,374 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src
2022-01-16T23:31:07,374 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver
2022-01-16T23:31:07,374 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cpu
2022-01-16T23:31:07,374 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/torch
2022-01-16T23:31:07,374 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda
2022-01-16T23:31:07,404 Emitting ninja build file /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/build.ninja...
2022-01-16T23:31:07,404 Compiling objects...
2022-01-16T23:31:07,404 Allowing ninja to set a default number of workers... (overridable by setting the environment variable MAX_JOBS=N)
2022-01-16T23:31:07,417 [1/7] /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_comm.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o -D__CUDA_NO_HALF_OPERATORS__ -D__CUDA_NO_HALF_CONVERSIONS__ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:07,417 FAILED: /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o
2022-01-16T23:31:07,417 /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_comm.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:07,418 nvcc fatal : Unknown option '-generate-dependencies-with-compile'
2022-01-16T23:31:07,418 [2/7] /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_sample.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:07,418 FAILED: /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o
2022-01-16T23:31:07,418 /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_sample.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:07,418 nvcc fatal : Unknown option '-generate-dependencies-with-compile'
2022-01-16T23:31:07,418 [3/7] /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_feature.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:07,418 FAILED: /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o
2022-01-16T23:31:07,418 /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_feature.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:07,418 nvcc fatal : Unknown option '-generate-dependencies-with-compile'
2022-01-16T23:31:07,591 [4/7] c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/trace.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/trace.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/trace.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:07,591 cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
2022-01-16T23:31:16,757 [5/7] c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/quiver.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:16,757 FAILED: /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o
2022-01-16T23:31:16,757 c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/quiver.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:16,757 cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
2022-01-16T23:31:16,757 In file included from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/Parallel.h:140:0,
2022-01-16T23:31:16,757 from /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:8,
2022-01-16T23:31:16,757 from /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/quiver.cpp:3:
2022-01-16T23:31:16,757 /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/ParallelOpenMP.h:83:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
2022-01-16T23:31:16,758 #pragma omp parallel for if ((end - begin) >= grain_size)
2022-01-16T23:31:16,758 ^
2022-01-16T23:31:16,758 In file included from /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/quiver.cpp:3:0:
2022-01-16T23:31:16,758 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp: In function ‘N quiver::safe_sample(const T*, const T*, N, T*)’:
2022-01-16T23:31:16,758 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:21:9: error: ‘sample’ is not a member of ‘std’
2022-01-16T23:31:16,758 std::sample(begin, end, outputs, k, g);
2022-01-16T23:31:16,758 ^
2022-01-16T23:31:16,758 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp: In constructor ‘quiver::quiver<T, (quiver::device_t)0u>::quiver(T, std::vector<std::pair<_FIter, FIter> >)’:
2022-01-16T23:31:16,758 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:41:20: error: expected unqualified-id before ‘[’ token
2022-01-16T23:31:16,758 const auto [row_idx, col_idx] = unzip(edge_index);
2022-01-16T23:31:16,758 ^
2022-01-16T23:31:16,758 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:42:54: error: ‘row_idx’ was not declared in this scope
2022-01-16T23:31:16,758 std::vector row_ptr = compress_row_idx(n, row_idx);
2022-01-16T23:31:16,758 ^
2022-01-16T23:31:16,758 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:44:19: error: ‘col_idx’ was not declared in this scope
2022-01-16T23:31:16,759 std::copy(col_idx.begin(), col_idx.end(), col_idx.begin());
2022-01-16T23:31:16,759 ^
2022-01-16T23:31:18,435 [6/7] c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cpu/tensor.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cpu/tensor.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cpu/tensor.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:18,435 cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
2022-01-16T23:31:18,436 In file included from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/Parallel.h:140:0,
2022-01-16T23:31:18,436 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/utils.h:3,
2022-01-16T23:31:18,436 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn/cloneable.h:5,
2022-01-16T23:31:18,436 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn.h:3,
2022-01-16T23:31:18,436 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/all.h:13,
2022-01-16T23:31:18,436 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/extension.h:4,
2022-01-16T23:31:18,436 from /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cpu/tensor.cpp:10:
2022-01-16T23:31:18,436 /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/ParallelOpenMP.h:83:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
2022-01-16T23:31:18,436 #pragma omp parallel for if ((end - begin) >= grain_size)
2022-01-16T23:31:18,436 ^

2022-01-16T23:31:22,532 [7/7] c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/torch/module.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/torch/module.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/torch/module.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:22,532 cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
2022-01-16T23:31:22,532 In file included from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/Parallel.h:140:0,
2022-01-16T23:31:22,532 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/utils.h:3,
2022-01-16T23:31:22,532 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn/cloneable.h:5,
2022-01-16T23:31:22,532 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn.h:3,
2022-01-16T23:31:22,532 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/all.h:13,
2022-01-16T23:31:22,532 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/extension.h:4,
2022-01-16T23:31:22,533 from /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/torch/module.cpp:1:
2022-01-16T23:31:22,533 /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/ParallelOpenMP.h:83:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
2022-01-16T23:31:22,533 #pragma omp parallel for if ((end - begin) >= grain_size)
2022-01-16T23:31:22,533 ^
2022-01-16T23:31:22,533 ninja: build stopped: subcommand failed.
2022-01-16T23:31:22,533 Traceback (most recent call last):
2022-01-16T23:31:22,533 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 1667, in _run_ninja_build
2022-01-16T23:31:22,534 subprocess.run(
2022-01-16T23:31:22,534 File "/home/user/miniconda3/envs/env/lib/python3.8/subprocess.py", line 512, in run
2022-01-16T23:31:22,534 raise CalledProcessError(retcode, process.args,
2022-01-16T23:31:22,534 subprocess.CalledProcessError: Command '['ninja', '-v']' returned non-zero exit status 1.

2022-01-16T23:31:22,534 The above exception was the direct cause of the following exception:

2022-01-16T23:31:22,535 Traceback (most recent call last):
2022-01-16T23:31:22,535 File "", line 1, in
2022-01-16T23:31:22,535 File "/tmp/pip-req-build-wc0b161h/setup.py", line 64, in
2022-01-16T23:31:22,535 setup(
2022-01-16T23:31:22,535 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/setuptools/init.py", line 153, in setup
2022-01-16T23:31:22,535 return distutils.core.setup(attrs)
2022-01-16T23:31:22,535 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/core.py", line 148, in setup
2022-01-16T23:31:22,535 dist.run_commands()
2022-01-16T23:31:22,535 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/dist.py", line 966, in run_commands
2022-01-16T23:31:22,535 self.run_command(cmd)
2022-01-16T23:31:22,535 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/dist.py", line 985, in run_command
2022-01-16T23:31:22,536 cmd_obj.run()
2022-01-16T23:31:22,536 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/wheel/bdist_wheel.py", line 299, in run
2022-01-16T23:31:22,536 self.run_command('build')
2022-01-16T23:31:22,536 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/cmd.py", line 313, in run_command
2022-01-16T23:31:22,536 self.distribution.run_command(command)
2022-01-16T23:31:22,536 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/dist.py", line 985, in run_command
2022-01-16T23:31:22,537 cmd_obj.run()
2022-01-16T23:31:22,537 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build.py", line 135, in run
2022-01-16T23:31:22,537 self.run_command(cmd_name)
2022-01-16T23:31:22,537 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/cmd.py", line 313, in run_command
2022-01-16T23:31:22,537 self.distribution.run_command(command)
2022-01-16T23:31:22,537 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/dist.py", line 985, in run_command
2022-01-16T23:31:22,537 cmd_obj.run()
2022-01-16T23:31:22,537 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/setuptools/command/build_ext.py", line 79, in run
2022-01-16T23:31:22,537 build_ext.run(self)
2022-01-16T23:31:22,537 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build_ext.py", line 340, in run
2022-01-16T23:31:22,538 self.build_extensions()
2022-01-16T23:31:22,538 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 708, in build_extensions
2022-01-16T23:31:22,538 build_ext.build_extensions(self)
2022-01-16T23:31:22,538 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build_ext.py", line 449, in build_extensions
2022-01-16T23:31:22,538 self.build_extensions_serial()
2022-01-16T23:31:22,538 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build_ext.py", line 474, in build_extensions_serial
2022-01-16T23:31:22,538 self.build_extension(ext)
2022-01-16T23:31:22,539 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/setuptools/command/build_ext.py", line 196, in build_extension
2022-01-16T23:31:22,539 build_ext.build_extension(self, ext)
2022-01-16T23:31:22,539 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build_ext.py", line 528, in build_extension
2022-01-16T23:31:22,539 objects = self.compiler.compile(sources,
2022-01-16T23:31:22,539 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 529, in unix_wrap_ninja_compile
2022-01-16T23:31:22,539 write_ninja_file_and_compile_objects(
2022-01-16T23:31:22,539 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 1354, in write_ninja_file_and_compile_objects
2022-01-16T23:31:22,540 run_ninja_build(
2022-01-16T23:31:22,540 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 1683, in run_ninja_build
2022-01-16T23:31:22,540 raise RuntimeError(message) from e
2022-01-16T23:31:22,541 RuntimeError: Error compiling objects for extension
2022-01-16T23:31:22,718 ERROR: Failed building wheel for torch-quiver
2022-01-16T23:31:22,719 Running setup.py clean for torch-quiver
2022-01-16T23:31:22,719 Running command /home/user/miniconda3/envs/env/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"'; file='"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' clean --all
2022-01-16T23:31:23,610 /home/user/miniconda3/envs/env/lib/python3.8/distutils/extension.py:131: UserWarning: Unknown Extension options: 'with_cuda'
2022-01-16T23:31:23,611 warnings.warn(msg)
2022-01-16T23:31:23,628 running clean
2022-01-16T23:31:23,628 removing 'build/temp.linux-x86_64-3.8' (and everything under it)
2022-01-16T23:31:23,631 removing 'build/lib.linux-x86_64-3.8' (and everything under it)
2022-01-16T23:31:23,631 'build/bdist.linux-x86_64' does not exist -- can't clean it
2022-01-16T23:31:23,631 'build/scripts-3.8' does not exist -- can't clean it
2022-01-16T23:31:23,631 removing 'build'
2022-01-16T23:31:23,785 Failed to build torch-quiver
2022-01-16T23:31:24,153 Installing collected packages: torch-quiver
2022-01-16T23:31:24,154 Created temporary directory: /tmp/pip-record-psoiog9y
2022-01-16T23:31:24,154 Running command /home/user/miniconda3/envs/env/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"'; file='"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-psoiog9y/install-record.txt --single-version-externally-managed --compile --install-headers /home/user/miniconda3/envs/env/include/python3.8/torch-quiver
2022-01-16T23:31:25,061 /home/user/miniconda3/envs/env/lib/python3.8/distutils/extension.py:131: UserWarning: Unknown Extension options: 'with_cuda'
2022-01-16T23:31:25,062 warnings.warn(msg)
2022-01-16T23:31:25,079 running install
2022-01-16T23:31:25,079 running build
2022-01-16T23:31:25,079 running build_py
2022-01-16T23:31:25,091 creating build
2022-01-16T23:31:25,091 creating build/lib.linux-x86_64-3.8
2022-01-16T23:31:25,092 creating build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:25,092 copying ./srcs/python/quiver/comm.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:25,092 copying ./srcs/python/quiver/init.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:25,092 copying ./srcs/python/quiver/shard_tensor.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:25,092 copying ./srcs/python/quiver/partition.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:25,092 copying ./srcs/python/quiver/feature.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:25,092 copying ./srcs/python/quiver/utils.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:25,092 copying ./srcs/python/quiver/async_cuda_sampler.py -> build/lib.linux-x86_64-3.8/quiver
2022-01-16T23:31:25,092 creating build/lib.linux-x86_64-3.8/quiver/multiprocessing
2022-01-16T23:31:25,093 copying ./srcs/python/quiver/multiprocessing/init.py -> build/lib.linux-x86_64-3.8/quiver/multiprocessing
2022-01-16T23:31:25,093 copying ./srcs/python/quiver/multiprocessing/reductions.py -> build/lib.linux-x86_64-3.8/quiver/multiprocessing
2022-01-16T23:31:25,093 creating build/lib.linux-x86_64-3.8/quiver/pyg
2022-01-16T23:31:25,093 copying ./srcs/python/quiver/pyg/init.py -> build/lib.linux-x86_64-3.8/quiver/pyg
2022-01-16T23:31:25,093 copying ./srcs/python/quiver/pyg/sage_sampler.py -> build/lib.linux-x86_64-3.8/quiver/pyg
2022-01-16T23:31:25,093 running build_ext
2022-01-16T23:31:25,118 building 'torch_quiver' extension
2022-01-16T23:31:25,118 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8
2022-01-16T23:31:25,118 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs
2022-01-16T23:31:25,118 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp
2022-01-16T23:31:25,118 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src
2022-01-16T23:31:25,118 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver
2022-01-16T23:31:25,119 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cpu
2022-01-16T23:31:25,119 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/torch
2022-01-16T23:31:25,119 creating /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda
2022-01-16T23:31:25,149 Emitting ninja build file /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/build.ninja...
2022-01-16T23:31:25,150 Compiling objects...
2022-01-16T23:31:25,150 Allowing ninja to set a default number of workers... (overridable by setting the environment variable MAX_JOBS=N)
2022-01-16T23:31:25,162 [1/7] /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_sample.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS -D__CUDA_NO_BFLOAT16_CONVERSIONS -D__CUDA_NO_HALF2_OPERATORS --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:25,162 FAILED: /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o
2022-01-16T23:31:25,163 /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_sample.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:25,163 nvcc fatal : Unknown option '-generate-dependencies-with-compile'
2022-01-16T23:31:25,163 [2/7] /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_comm.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:25,163 FAILED: /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o
2022-01-16T23:31:25,163 /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_comm.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_comm.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:25,163 nvcc fatal : Unknown option '-generate-dependencies-with-compile'
2022-01-16T23:31:25,163 [3/7] /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_feature.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="gcc"' '-DPYBIND11_STDLIB="libstdcpp"' '-DPYBIND11_BUILD_ABI="cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:25,163 FAILED: /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o
2022-01-16T23:31:25,164 /usr/local/cuda/bin/nvcc --generate-dependencies-with-compile --dependency-output /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o.d -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cuda/quiver_feature.cu -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_feature.o -D__CUDA_NO_HALF_OPERATORS -D__CUDA_NO_HALF_CONVERSIONS_ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options ''"'"'-fPIC'"'"'' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
2022-01-16T23:31:25,164 nvcc fatal : Unknown option '-generate-dependencies-with-compile'
2022-01-16T23:31:25,344 [4/7] c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/trace.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/trace.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/trace.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:25,345 cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
2022-01-16T23:31:34,346 [5/7] c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/quiver.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:34,346 FAILED: /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o
2022-01-16T23:31:34,346 c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/quiver.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/quiver.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:34,347 cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
2022-01-16T23:31:34,347 In file included from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/Parallel.h:140:0,
2022-01-16T23:31:34,347 from /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:8,
2022-01-16T23:31:34,347 from /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/quiver.cpp:3:
2022-01-16T23:31:34,347 /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/ParallelOpenMP.h:83:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
2022-01-16T23:31:34,347 #pragma omp parallel for if ((end - begin) >= grain_size)
2022-01-16T23:31:34,347 ^
2022-01-16T23:31:34,347 In file included from /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/quiver.cpp:3:0:
2022-01-16T23:31:34,348 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp: In function ‘N quiver::safe_sample(const T, const T, N, T*)’:
2022-01-16T23:31:34,348 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:21:9: error: ‘sample’ is not a member of ‘std’
2022-01-16T23:31:34,348 std::sample(begin, end, outputs, k, g);
2022-01-16T23:31:34,348 ^
2022-01-16T23:31:34,348 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp: In constructor ‘quiver::quiver<T, (quiver::device_t)0u>::quiver(T, std::vector<std::pair<_FIter, FIter> >)’:
2022-01-16T23:31:34,348 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:41:20: error: expected unqualified-id before ‘[’ token
2022-01-16T23:31:34,348 const auto [row_idx, col_idx] = unzip(edge_index);
2022-01-16T23:31:34,348 ^
2022-01-16T23:31:34,348 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:42:54: error: ‘row_idx’ was not declared in this scope
2022-01-16T23:31:34,349 std::vector row_ptr = compress_row_idx(n, row_idx);
2022-01-16T23:31:34,349 ^
2022-01-16T23:31:34,349 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:44:19: error: ‘col_idx’ was not declared in this scope
2022-01-16T23:31:34,349 std::copy(col_idx.begin(), col_idx.end(), col_idx.begin());
2022-01-16T23:31:34,349 ^
2022-01-16T23:31:35,688 [6/7] c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cpu/tensor.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cpu/tensor.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cpu/tensor.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:35,688 cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
2022-01-16T23:31:35,688 In file included from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/Parallel.h:140:0,
2022-01-16T23:31:35,688 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/utils.h:3,
2022-01-16T23:31:35,689 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn/cloneable.h:5,
2022-01-16T23:31:35,689 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn.h:3,
2022-01-16T23:31:35,689 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/all.h:13,
2022-01-16T23:31:35,689 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/extension.h:4,
2022-01-16T23:31:35,689 from /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/cpu/tensor.cpp:10:
2022-01-16T23:31:35,689 /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/ParallelOpenMP.h:83:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
2022-01-16T23:31:35,689 #pragma omp parallel for if ((end - begin) >= grain_size)
2022-01-16T23:31:35,689 ^
2022-01-16T23:31:39,502 [7/7] c++ -MMD -MF /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/torch/module.o.d -pthread -B /home/user/miniconda3/envs/env/compiler_compat -Wl,--sysroot=/ -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -fPIC -I/tmp/pip-req-build-wc0b161h/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/THC -I/home/user/miniconda3/envs/env/include/python3.8 -c -c /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/torch/module.cpp -o /tmp/pip-req-build-wc0b161h/build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/torch/module.o -std=c++17 -DHAVE_CUDA -DTORCH_API_INCLUDE_EXTENSION_H '-DPYBIND11_COMPILER_TYPE="_gcc"' '-DPYBIND11_STDLIB="_libstdcpp"' '-DPYBIND11_BUILD_ABI="_cxxabi1011"' -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0
2022-01-16T23:31:39,503 cc1plus: warning: command line option ‘-Wstrict-prototypes’ is valid for C/ObjC but not for C++
2022-01-16T23:31:39,503 In file included from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/Parallel.h:140:0,
2022-01-16T23:31:39,503 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/utils.h:3,
2022-01-16T23:31:39,503 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn/cloneable.h:5,
2022-01-16T23:31:39,503 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/nn.h:3,
2022-01-16T23:31:39,504 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/csrc/api/include/torch/all.h:13,
2022-01-16T23:31:39,504 from /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/torch/extension.h:4,
2022-01-16T23:31:39,504 from /tmp/pip-req-build-wc0b161h/srcs/cpp/src/quiver/torch/module.cpp:1:
2022-01-16T23:31:39,504 /home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/include/ATen/ParallelOpenMP.h:83:0: warning: ignoring #pragma omp parallel [-Wunknown-pragmas]
2022-01-16T23:31:39,504 #pragma omp parallel for if ((end - begin) >= grain_size)
2022-01-16T23:31:39,504 ^
2022-01-16T23:31:39,504 ninja: build stopped: subcommand failed.
2022-01-16T23:31:39,504 Traceback (most recent call last):
2022-01-16T23:31:39,504 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 1667, in _run_ninja_build
2022-01-16T23:31:39,504 subprocess.run(
2022-01-16T23:31:39,505 File "/home/user/miniconda3/envs/env/lib/python3.8/subprocess.py", line 512, in run
2022-01-16T23:31:39,505 raise CalledProcessError(retcode, process.args,
2022-01-16T23:31:39,505 subprocess.CalledProcessError: Command '['ninja', '-v']' returned non-zero exit status 1.

2022-01-16T23:31:39,505 The above exception was the direct cause of the following exception:

2022-01-16T23:31:39,505 Traceback (most recent call last):
2022-01-16T23:31:39,506 File "", line 1, in
2022-01-16T23:31:39,506 File "/tmp/pip-req-build-wc0b161h/setup.py", line 64, in
2022-01-16T23:31:39,506 setup(
2022-01-16T23:31:39,506 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/setuptools/init.py", line 153, in setup
2022-01-16T23:31:39,506 return distutils.core.setup(**attrs)
2022-01-16T23:31:39,506 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/core.py", line 148, in setup
2022-01-16T23:31:39,506 dist.run_commands()
2022-01-16T23:31:39,506 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/dist.py", line 966, in run_commands
2022-01-16T23:31:39,506 self.run_command(cmd)
2022-01-16T23:31:39,506 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/dist.py", line 985, in run_command
2022-01-16T23:31:39,507 cmd_obj.run()
2022-01-16T23:31:39,507 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/setuptools/command/install.py", line 61, in run
2022-01-16T23:31:39,507 return orig.install.run(self)
2022-01-16T23:31:39,507 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/install.py", line 545, in run
2022-01-16T23:31:39,507 self.run_command('build')
2022-01-16T23:31:39,507 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/cmd.py", line 313, in run_command
2022-01-16T23:31:39,507 self.distribution.run_command(command)
2022-01-16T23:31:39,507 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/dist.py", line 985, in run_command
2022-01-16T23:31:39,507 cmd_obj.run()
2022-01-16T23:31:39,508 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build.py", line 135, in run
2022-01-16T23:31:39,508 self.run_command(cmd_name)
2022-01-16T23:31:39,508 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/cmd.py", line 313, in run_command
2022-01-16T23:31:39,508 self.distribution.run_command(command)
2022-01-16T23:31:39,508 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/dist.py", line 985, in run_command
2022-01-16T23:31:39,508 cmd_obj.run()
2022-01-16T23:31:39,508 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/setuptools/command/build_ext.py", line 79, in run
2022-01-16T23:31:39,508 _build_ext.run(self)
2022-01-16T23:31:39,508 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build_ext.py", line 340, in run
2022-01-16T23:31:39,509 self.build_extensions()
2022-01-16T23:31:39,509 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 708, in build_extensions
2022-01-16T23:31:39,509 build_ext.build_extensions(self)
2022-01-16T23:31:39,509 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build_ext.py", line 449, in build_extensions
2022-01-16T23:31:39,509 self._build_extensions_serial()
2022-01-16T23:31:39,509 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build_ext.py", line 474, in _build_extensions_serial
2022-01-16T23:31:39,509 self.build_extension(ext)
2022-01-16T23:31:39,509 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/setuptools/command/build_ext.py", line 196, in build_extension
2022-01-16T23:31:39,509 _build_ext.build_extension(self, ext)
2022-01-16T23:31:39,510 File "/home/user/miniconda3/envs/env/lib/python3.8/distutils/command/build_ext.py", line 528, in build_extension
2022-01-16T23:31:39,510 objects = self.compiler.compile(sources,
2022-01-16T23:31:39,510 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 529, in unix_wrap_ninja_compile
2022-01-16T23:31:39,510 _write_ninja_file_and_compile_objects(
2022-01-16T23:31:39,510 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 1354, in _write_ninja_file_and_compile_objects
2022-01-16T23:31:39,510 _run_ninja_build(
2022-01-16T23:31:39,511 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/torch/utils/cpp_extension.py", line 1683, in _run_ninja_build
2022-01-16T23:31:39,511 raise RuntimeError(message) from e
2022-01-16T23:31:39,511 RuntimeError: Error compiling objects for extension
2022-01-16T23:31:39,724 ERROR: Command errored out with exit status 1: /home/user/miniconda3/envs/env/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"'; file='"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-psoiog9y/install-record.txt --single-version-externally-managed --compile --install-headers /home/user/miniconda3/envs/env/include/python3.8/torch-quiver Check the logs for full command output.
2022-01-16T23:31:39,724 Exception information:
2022-01-16T23:31:39,724 Traceback (most recent call last):
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/req/req_install.py", line 840, in install
2022-01-16T23:31:39,724 success = install_legacy(
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/operations/install/legacy.py", line 86, in install
2022-01-16T23:31:39,724 raise LegacyInstallFailure
2022-01-16T23:31:39,724 pip._internal.operations.install.legacy.LegacyInstallFailure
2022-01-16T23:31:39,724
2022-01-16T23:31:39,724 During handling of the above exception, another exception occurred:
2022-01-16T23:31:39,724
2022-01-16T23:31:39,724 Traceback (most recent call last):
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/cli/base_command.py", line 224, in _main
2022-01-16T23:31:39,724 status = self.run(options, args)
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/cli/req_command.py", line 180, in wrapper
2022-01-16T23:31:39,724 return func(self, options, args)
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/commands/install.py", line 394, in run
2022-01-16T23:31:39,724 installed = install_given_reqs(
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/req/init.py", line 82, in install_given_reqs
2022-01-16T23:31:39,724 requirement.install(
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/req/req_install.py", line 858, in install
2022-01-16T23:31:39,724 six.reraise(*exc.parent)
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_vendor/six.py", line 703, in reraise
2022-01-16T23:31:39,724 raise value
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/operations/install/legacy.py", line 74, in install
2022-01-16T23:31:39,724 runner(
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/utils/subprocess.py", line 271, in runner
2022-01-16T23:31:39,724 call_subprocess(
2022-01-16T23:31:39,724 File "/home/user/miniconda3/envs/env/lib/python3.8/site-packages/pip/_internal/utils/subprocess.py", line 240, in call_subprocess
2022-01-16T23:31:39,724 raise InstallationError(exc_msg)
2022-01-16T23:31:39,724 pip._internal.exceptions.InstallationError: Command errored out with exit status 1: /home/user/miniconda3/envs/env/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"'; file='"'"'/tmp/pip-req-build-wc0b161h/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-psoiog9y/install-record.txt --single-version-externally-managed --compile --install-headers /home/user/miniconda3/envs/env/include/python3.8/torch-quiver Check the logs for full command output.
2022-01-16T23:31:39,791 Removed build tracker: '/tmp/pip-req-tracker-jt_5iad6'

[decoherencer]

I tried cpp_extension.BuildExtension.with_options(use_ninja=False) in setup.py from another reference, but that failed with more gcc errors.

PyTorch built with:

• GCC 7.3
• C++ Version: 201402
• Intel(R) oneAPI Math Kernel Library Version 2021.2-Product Build 20210312 for Intel(R) 64 architecture applications
• Intel(R) MKL-DNN v1.7.0 (Git Hash 7aed236906b1f7a05c0917e5257a1af05e9ff683)
• OpenMP 201511 (a.k.a. OpenMP 4.5)
• NNPACK is enabled
• CPU capability usage: AVX2
• CUDA Runtime 10.2
• NVCC architecture flags: -gencode;arch=compute_37,code=sm_37;-gencode;arch=compute_50,code=sm_50;-gencode;arch=compute_60,code=sm_60;-gencode;arch=compute_61,code=sm_61;-gencode;arch=compute_70,code=sm_70;-gencode;arch=compute_75,code=sm_75;-gencode;arch=compute_37,code=compute_37
• CuDNN 7.6.5
• Magma 2.5.2
• Build settings: BLAS_INFO=mkl, BUILD_TYPE=Release, CUDA_VERSION=10.2, CUDNN_VERSION=7.6.5, CXX_COMPILER=/opt/rh/devtoolset-7/root/usr/bin/c++, CXX_FLAGS= -Wno-deprecated -fvisibility-inlines-hidden -DUSE_PTHREADPOOL -fopenmp -DNDEBUG -DUSE_KINETO -DUSE_FBGEMM -DUSE_QNNPACK -DUSE_PYTORCH_QNNPACK -DUSE_XNNPACK -O2 -fPIC -Wno-narrowing -Wall -Wextra -Werror=return-type -Wno-missing-field-initializers -Wno-type-limits -Wno-array-bounds -Wno-unknown-pragmas -Wno-sign-compare -Wno-unused-parameter -Wno-unused-variable -Wno-unused-function -Wno-unused-result -Wno-unused-local-typedefs -Wno-strict-overflow -Wno-strict-aliasing -Wno-error=deprecated-declarations -Wno-stringop-overflow -Wno-psabi -Wno-error=pedantic -Wno-error=redundant-decls -Wno-error=old-style-cast -fdiagnostics-color=always -faligned-new -Wno-unused-but-set-variable -Wno-maybe-uninitialized -fno-math-errno -fno-trapping-math -Werror=format -Wno-stringop-overflow, LAPACK_INFO=mkl, PERF_WITH_AVX=1, PERF_WITH_AVX2=1, PERF_WITH_AVX512=1, TORCH_VERSION=1.8.1, USE_CUDA=ON, USE_CUDNN=ON, USE_EXCEPTION_PTR=1, USE_GFLAGS=OFF, USE_GLOG=OFF, USE_MKL=ON, USE_MKLDNN=ON, USE_MPI=OFF, USE_NCCL=ON, USE_NNPACK=ON, USE_OPENMP=ON,

[ZenoTan]

2022-01-16T23:31:16,758 /tmp/pip-req-build-wc0b161h/./srcs/cpp/include/quiver/quiver.cpu.hpp:21:9: error: ‘sample’ is not a member of ‘std’

I suspect this is because your cpp compiler has not supported std::sample. I found it is supported when std=c++17.

[decoherencer]

oh, thanks.
I couldn't update GCC because I don't have root permissions, but I setup a junest and installed latest gcc on it, but I am not sure how to use this updated GCC to build now while utilising all the packages of base ubuntu, any suggestions?

[decoherencer]

I also tried installing gcc, gxx and cudatoolkit-dev inside conda

gcc (GCC) 11.2.0
g++ (GCC) 11.2.0
nvcc: NVIDIA (R) Cuda compiler driver
Cuda compilation tools, release 10.1, V10.1.243

and the new error with the above changes is that the newer GCC makes it pass the previous std::sample error, but the newer Cuda isn't accepting it now:

/home/user/miniconda3/envs/phoenix/bin/nvcc -I/tmp/pip-req-build-vrn7wfzm/./srcs/cpp/include -I/usr/local/cuda/include -I/home/user/miniconda3/envs/phoenix/lib/python3.8/site-packages/torch/include -I/home/user/miniconda3/envs/phoenix/lib/python3.8/site-packages/torch/include/torch/csrc/api/include -I/home/user/miniconda3/envs/phoenix/lib/python3.8/site-packages/torch/include/TH -I/home/user/miniconda3/envs/phoenix/lib/python3.8/site-packages/torch/include/THC -I/home/sai/miniconda3/envs/phoenix/include/python3.8 -c srcs/cpp/src/quiver/cuda/quiver_sample.cu -o build/temp.linux-x86_64-3.8/srcs/cpp/src/quiver/cuda/quiver_sample.o -D__CUDA_NO_HALF_OPERATORS__ -D__CUDA_NO_HALF_CONVERSIONS__ -D__CUDA_NO_BFLOAT16_CONVERSIONS__ -D__CUDA_NO_HALF2_OPERATORS__ --expt-relaxed-constexpr --compiler-options '-fPIC' -O3 --expt-extended-lambda -lnuma -DTORCH_API_INCLUDE_EXTENSION_H -DPYBIND11_COMPILER_TYPE="_gcc" -DPYBIND11_STDLIB="_libstdcpp" -DPYBIND11_BUILD_ABI="_cxxabi1011" -DTORCH_EXTENSION_NAME=torch_quiver -D_GLIBCXX_USE_CXX11_ABI=0 -gencode=arch=compute_61,code=compute_61 -gencode=arch=compute_61,code=sm_61 -std=c++14
In file included from /usr/local/cuda/include/host_config.h:50,
from /usr/local/cuda/include/cuda_runtime.h:78,
from :
/usr/local/cuda/include/crt/host_config.h:121:2: error: #error -- unsupported GNU version! gcc versions later than 6 are not supported!
121 | #error -- unsupported GNU version! gcc versions later than 6 are not supported!
| ^~~~~
error: command '/home/sai/miniconda3/envs/phoenix/bin/nvcc' failed with exit status 1
ERROR: Failed building wheel for torch-quiver

[decoherencer]

so, It looks like the nvcc on my system is 9.1 which has gcc 6 as supported version, and the conda cuda version isn't used while building.
Although during the wheel building it could detect the newer CUDA 10.1 for CUDA_MISMATCH_WARN check, what can I change this -I/usr/local/cuda/include to also match to conda's cuda?

---

Looks like there isn't easy way to update cuda except via root permissions, the conda package cudatoolkit-dev has just created nvcc without any other actual cuda headers and else.

[ZenoTan]

You can try nvidia docker, but I'm not sure if it helps without root privilege.

[decoherencer]

ok thanks, since this was now a specific setup issue, we can close it.