Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

why unclassified #33

Open
CaiWang0503 opened this issue Mar 28, 2022 · 1 comment
Open

why unclassified #33

CaiWang0503 opened this issue Mar 28, 2022 · 1 comment

Comments

@CaiWang0503
Copy link

Screenshot 2022-03-29 at 00 46 24

Screenshot 2022-03-29 at 00 46 04

i run a sequence with custom database, it can be found on the database (in blastn flie), but the output (blca.out flie) for this seq is unclassified. could someone tell me how to solve this?

@YJulyXing
Copy link
Collaborator

Hello,

Although blast found hits for natl_01, from the blast output you provided, it seems like the bitscores (column 13) didn't pass BLCA's default setting of bitscore (minimum 100). You could try to set a lower bitscore value for BLCA. If the same issue still happens, please let us know. We could take a look at your output and try to fix the issue. Thank you.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants