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@RareCareWA

RareCareWA

README.md

Hi there đź‘‹

Welcome to the RareCare WA org!

Colombo Scholarship Students

You can find tools to help you in the forked repos as well as project boards for each of the internship projects except the Cliniface project working with @richeytastic.

Not all tools are able to be forked into GitHub (e.g. those in GitLab) so the other resources below may also be helpful...

Annotation tools

Sypmtom Annotation Made Simple (SAMS) https://www.genecascade.org/sams-cgi/index.cgi

doc2hpo https://doc2hpo.wglab.org/index.jsp

APIs (excludes Terminology Servers)

Symptom Annotation Made Simple https://www.genecascade.org/sams-cgi/index.cgi#api

EBI Ontology Lookup Service https://www.ebi.ac.uk/ols/docs/api

ZOOMA Annotation (uses EBI OLS per above) https://www.ebi.ac.uk/spot/zooma/docs/api

Terminology Servers

FHIR based terminology resources including SNOMED CT-AU and HPO https://ontoserver.csiro.au/docs/6/api-fhir.html

Popular repositories

  1. redcap_fhir_ontology_provider redcap_fhir_ontology_provider Public

    Forked from aehrc/redcap_fhir_ontology_provider

    REDCap external module provides support for referencing an external Fhir based ontology server to lookup values.

    PHP

  2. redcap_advanced_fhir_ontology redcap_advanced_fhir_ontology Public

    Forked from aehrc/redcap_advanced_fhir_ontology

    REDCap External Module to give autocomplete using a FHIR terminology server with advanced options.

    PHP

  3. redmatch redmatch Public

    Forked from aehrc/redmatch

    A rules-based transformation engine that allows exporting data in REDCap as FHIR resources.

    Java

  4. fhir-tx-transforms fhir-tx-transforms Public

    Forked from aehrc/fhir-tx-transforms

    Transformations of various code systems to FHIR.

    Java

  5. fhir-hgnc fhir-hgnc Public

    Forked from aehrc/fhir-hgnc

    Transforms HGNC source files into FHIR code systems.

    Java

  6. doc2hpo doc2hpo Public

    Forked from stormliucong/doc2hpo

    Java

Repositories

Showing 10 of 33 repositories
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People

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