Merge branch 'master' of https://github.com/rasbt/biopandas

biopandas/__init__.py

@@ -4,5 +4,5 @@
 # Project Website: http://rasbt.github.io/biopandas/
 # Code Repository: https://github.com/rasbt/biopandas
 
-__version__ = '0.2.2dev'
+__version__ = '0.2.2'
 __author__ = "Sebastian Raschka <mail@sebastianraschka.com>"

docs/sources/CHANGELOG.md

@@ -3,7 +3,7 @@
 The CHANGELOG for the current development version is available at
 [https://github.com/rasbt/biopandas/blob/master/docs/sources/CHANGELOG.md](https://github.com/rasbt/biopandas/blob/master/docs/sources/CHANGELOG.md).
 
-### 0.2.2dev (TBD)
+### 0.2.2 (06-07-2017)
 
 ##### Downloads
 
@@ -12,11 +12,12 @@ The CHANGELOG for the current development version is available at
 
 ##### New Features
 
-- New `PandasPdb.pdb_path` and `PandasMol2.mol2_path` attributes that store the location of the data file last read.
+- -
 
 ##### Changes
 
--  Add meaningful error message if attempting to overwrite the `df` attributes of `PandasMol2` and `PandasPdb` directly.
+-  Raises a meaningful error message if attempting to overwrite the `df` attributes of `PandasMol2` and `PandasPdb` directly.
+-  Added `PandasPdb.pdb_path` and `PandasMol2.mol2_path` attributes that store the location of the data file last read.
 
 ##### Bug Fixes
 

docs/sources/api_subpackages/biopandas.mol2.md

@@ -1,4 +1,4 @@
-biopandas version: 0.2.1
+biopandas version: 0.2.2dev
 ## PandasMol2
 
 *PandasMol2()*
@@ -21,6 +21,11 @@ Object for working with Tripos Mol2 structure files.
 
     ID, code, or name of the molecule stored
 
+
+- `pdb_path` : str
+
+    Location of the MOL2 file that was read in via `read_mol2`
+
 ### Methods
 
 <hr>

docs/sources/api_subpackages/biopandas.pdb.md

@@ -1,4 +1,4 @@
-biopandas version: 0.2.1
+biopandas version: 0.2.2dev
 ## PandasPdb
 
 *PandasPdb()*
@@ -20,6 +20,13 @@ Object for working with Protein Databank structure files.
     PDB file contents in raw text format
 
 
+- `pdb_path` : str
+
+    Location of the PDB file that was read in via `read_pdb`
+    or URL of the page where the PDB content was fetched from
+    if `fetch_pdb` was called
+
+
 - `header` : str
 
     PDB file description

docs/sources/api_subpackages/biopandas.testutils.md

@@ -1 +1,27 @@
-biopandas version: 0.2.1
+biopandas version: 0.2.2dev
+## assert_raises
+
+*assert_raises(exception_type, message, func, *args, **kwargs)*
+
+Check that an exception is raised with a specific message
+
+**Parameters**
+
+- `exception_type` : exception
+
+    The exception that should be raised
+
+- `message` : str (default: None)
+
+    The error message that should be raised. Ignored if False or None
+
+- `func` : callable
+
+    The function that raises the exception
+
+- `*args` : positional arguments to `func`
+
+
+- `**kwargs` : keyword arguments to `func`
+
+