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meta.yaml
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/
meta.yaml
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{% set version = "1.42.0" %}
{% set name = "ChIPseqR" %}
{% set bioc = "3.11" %}
package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
md5: 9703f0473cdb54ccb894bd0007b00a59
build:
number: 0
rpaths:
- lib/R/lib/
- lib/
requirements:
host:
- 'bioconductor-biocgenerics >=0.34.0,<0.35.0'
- 'bioconductor-biostrings >=2.56.0,<2.57.0'
- 'bioconductor-genomicranges >=1.40.0,<1.41.0'
- 'bioconductor-hilbertvis >=1.46.0,<1.47.0'
- 'bioconductor-iranges >=2.22.0,<2.23.0'
- 'bioconductor-s4vectors >=0.26.0,<0.27.0'
- 'bioconductor-shortread >=1.46.0,<1.47.0'
- r-base
- r-fbasics
- r-timsac
- libblas
- liblapack
run:
- 'bioconductor-biocgenerics >=0.34.0,<0.35.0'
- 'bioconductor-biostrings >=2.56.0,<2.57.0'
- 'bioconductor-genomicranges >=1.40.0,<1.41.0'
- 'bioconductor-hilbertvis >=1.46.0,<1.47.0'
- 'bioconductor-iranges >=2.22.0,<2.23.0'
- 'bioconductor-s4vectors >=0.26.0,<0.27.0'
- 'bioconductor-shortread >=1.46.0,<1.47.0'
- r-base
- r-fbasics
- r-timsac
build:
- {{ compiler('c') }}
- make
test:
commands:
- '$R -e "library(''{{ name }}'')"'
about:
home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
license: 'GPL (>= 2)'
summary: 'Identifying Protein Binding Sites in High-Throughput Sequencing Data'
description: 'ChIPseqR identifies protein binding sites from ChIP-seq and nucleosome positioning experiments. The model used to describe binding events was developed to locate nucleosomes but should flexible enough to handle other types of experiments as well.'
license_file: '{{ environ["PREFIX"] }}/lib/R/share/licenses/GPL-3'