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meta.yaml
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meta.yaml
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{% set version = "1.32.0" %}
{% set name = "BADER" %}
{% set bioc = "3.14" %}
package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name|lower }}/bioconductor-{{ name|lower }}_{{ version }}_src_all.tar.gz'
md5: f92aeb190355401dda2019511205db5a
build:
number: 0
rpaths:
- lib/R/lib/
- lib/
# Suggests: pasilla (>= 0.2.10)
requirements:
host:
- r-base
- libblas
- liblapack
run:
- r-base
build:
- {{ compiler('c') }}
- {{ compiler('cxx') }}
- make
test:
commands:
- '$R -e "library(''{{ name }}'')"'
about:
home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
license: GPL-2
summary: 'Bayesian Analysis of Differential Expression in RNA Sequencing Data'
description: 'For RNA sequencing count data, BADER fits a Bayesian hierarchical model. The algorithm returns the posterior probability of differential expression for each gene between two groups A and B. The joint posterior distribution of the variables in the model can be returned in the form of posterior samples, which can be used for further down-stream analyses such as gene set enrichment.'
license_file: '{{ environ["PREFIX"] }}/lib/R/share/licenses/GPL-2'
extra:
identifiers:
- biotools:bader
- doi:10.1038/nmeth.3252
parent_recipe:
name: bioconductor-bader
path: recipes/bioconductor-bader
version: 1.20.0