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meta.yaml
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meta.yaml
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{% set version = "1.20.0" %}
{% set name = "branchpointer" %}
{% set bioc = "3.14" %}
package:
name: 'bioconductor-{{ name|lower }}'
version: '{{ version }}'
source:
url:
- 'https://bioconductor.org/packages/{{ bioc }}/bioc/src/contrib/{{ name }}_{{ version }}.tar.gz'
- 'https://bioarchive.galaxyproject.org/{{ name }}_{{ version }}.tar.gz'
- 'https://depot.galaxyproject.org/software/bioconductor-{{ name }}/bioconductor-{{ name }}_{{ version }}_src_all.tar.gz'
md5: 1ab1891e33e453e4acab8363a3cbee88
build:
number: 0
rpaths:
- lib/R/lib/
- lib/
noarch: generic
# Suggests: knitr, BiocStyle
requirements:
host:
- 'bioconductor-biomart >=2.50.0,<2.51.0'
- 'bioconductor-biostrings >=2.62.0,<2.63.0'
- 'bioconductor-bsgenome.hsapiens.ucsc.hg38 >=1.4.0,<1.5.0'
- 'bioconductor-genomeinfodb >=1.30.0,<1.31.0'
- 'bioconductor-genomicranges >=1.46.0,<1.47.0'
- 'bioconductor-iranges >=2.28.0,<2.29.0'
- 'bioconductor-rtracklayer >=1.54.0,<1.55.0'
- 'bioconductor-s4vectors >=0.32.0,<0.33.0'
- r-base
- r-caret
- r-cowplot
- r-data.table
- r-gbm
- r-ggplot2
- r-kernlab
- r-plyr
- r-stringr
run:
- 'bioconductor-biomart >=2.50.0,<2.51.0'
- 'bioconductor-biostrings >=2.62.0,<2.63.0'
- 'bioconductor-bsgenome.hsapiens.ucsc.hg38 >=1.4.0,<1.5.0'
- 'bioconductor-genomeinfodb >=1.30.0,<1.31.0'
- 'bioconductor-genomicranges >=1.46.0,<1.47.0'
- 'bioconductor-iranges >=2.28.0,<2.29.0'
- 'bioconductor-rtracklayer >=1.54.0,<1.55.0'
- 'bioconductor-s4vectors >=0.32.0,<0.33.0'
- r-base
- r-caret
- r-cowplot
- r-data.table
- r-gbm
- r-ggplot2
- r-kernlab
- r-plyr
- r-stringr
test:
commands:
- '$R -e "library(''{{ name }}'')"'
about:
home: 'https://bioconductor.org/packages/{{ bioc }}/bioc/html/{{ name }}.html'
license: 'BSD_3_clause + file LICENSE'
summary: 'Prediction of intronic splicing branchpoints'
description: 'Predicts branchpoint probability for sites in intronic branchpoint windows. Queries can be supplied as intronic regions; or to evaluate the effects of mutations, SNPs.'
license_file: LICENSE