Unable to use odo with complex NodeJS project (big number of dependencies) #6836

kadel · 2023-05-23T10:34:18Z

/kind bug

What versions of software are you using?

Operating System:

Output of odo version:
odo v3.10.0 (d558780)

How did you run odo exactly?

git clone https://github.com/backstage/backstage
cd backstage
# place following devfile.yaml to the the directory
odo dev --port-forward 3000:3000 --port-forward 7007:7007

devfile.yaml

schemaVersion: 2.2.0
metadata:
  name: my-backstage

commands:
  - id: install-yarn
    exec:
      commandLine: npm install -g yarn
      workingDir: ${PROJECT_SOURCE}
      component: nodejs

  - id: yarn-install
    exec:
      commandLine: npx yarn install
      component: nodejs
      workingDir: ${PROJECT_SOURCE}
      group:
        kind: build
        isDefault: true
    
  - id: run-start
    exec:
      commandLine: npx yarn run start
      component: nodejs
      workingDir: ${PROJECT_SOURCE}
      group:
        kind: run
        isDefault: true
    
components:
  - name: nodejs
    container:
      image: registry.access.redhat.com/ubi9/nodejs-18:latest
      sourceMapping: /projects
      command: ['tail', '-f', '/dev/null']
      memoryLimit: 2Gi
      # workaround for https://github.com/redhat-developer/odo/issues/6836
      volumeMounts:
        - name: node-modules
          path: /projects/node_modules
      endpoints:
        - name: frontend
          targetPort: 3000
          exposure: public
        - name: backend
          targetPort: 7007
          exposure: public
  
  - name: node-modules
    volume:
      size: 3Gi
      
      

      
events:
  postStart:
    - install-yarn

Actual behavior

 odo dev
  __
 /  \__     Developing using the "my-backstage" Devfile
 \__/  \    Namespace: tkral-dev
 /  \__/    odo version: v3.10.0
 \__/

↪ Running on the cluster in Dev mode
 •  Waiting for Kubernetes resources  ...
 ⚠  Pod is Pending
 ✓  Pod is Running
 ✓  Syncing files into the container [4s]
 ✓  Executing post-start command in container (command: install-yarn) [3s]
 ✗  Building your application in container (command: build) [3m]

added 1 package in 1s
npm notice
npm notice New minor version of npm available! 9.5.0 -> 9.6.7
npm notice Changelog: <https://github.com/npm/cli/releases/tag/v9.6.7>
npm notice Run `npm install -g npm@9.6.7` to update!
npm notice
yarn install v1.22.19
[1/5] Validating package.json...
[2/5] Resolving packages...
2" has unmet peer dependency "@codemirror/state@>=6.0.0".
warning "workspace-aggregator-057fe7c5-b0d7-43a3-9266-e6447bf6795c > app > @backstage/plugin-scaffolder > @uiw/react-codemirror@4.20.2" has unmet peer dependency "@codemirror/theme-one-dark@>=6.0.0".
warning "workspace-aggregator-057fe7c5-b0d7-43a3-9266-e6447bf6795c > app > @backstage/plugin-scaffolder > @uiw/react-codemirror@4.20.2" has unmet peer dependency "codemirror@>=6.0.0".
warning "workspace-aggregator-057fe7c5-b0d7-43a3-9266-e6447bf6795c > app > @backstage/plugin-scaffolder > @backstage/plugin-scaffolder-react > @rjsf/material-ui-v5@5.6.0" has incorrect peer dependency "@rjsf/core@^5.0.0".
warning "workspace-aggregator-057fe7c5-b0d7-43a3-9266-e6447bf6795c > app > @backstage/plugin-scaffolder > @uiw/react-codemirror > @uiw/codemirror-extensions-basic-setup@4.20.2" has unmet peer dependency "@codemirror/autocomplete@>=6.0.0".
warning "workspace-aggregator-057fe7c5-b0d7-43a3-9266-e6447bf6795c > app > @backstage/plugin-scaffolder > @uiw/react-codemirror > @uiw/codemirror-extensions-basic-setup@4.20.2" has unmet peer dependency "@codemirror/lint@>=6.0.0".
warning "workspace-aggregator-057fe7c5-b0d7-43a3-9266-e6447bf6795c > app > @backstage/plugin-scaffolder > @uiw/react-codemirror > @uiw/codemirror-extensions-basic-setup@4.20.2" has unmet peer dependency "@codemirror/search@>=6.0.0".
warning "workspace-aggregator-057fe7c5-b0d7-43a3-9266-e6447bf6795c > backend > @backstage/plugin-techdocs-backend > @backstage/plugin-techdocs-node > @aws-sdk/lib-storage@3.335.0" has unmet peer dependency "@aws-sdk/abort-controller@^3.0.0".
warning "workspace-aggregator-057fe7c5-b0d7-43a3-9266-e6447bf6795c > app > @backstage/plugin-api-docs > graphiql > @graphiql/react > codemirror-graphql@1.3.2" has unmet peer dependency "@codemirror/language@^0.20.0".
warning "workspace-aggregator-057fe7c5-b0d7-43a3-9266-e6447bf6795c > app > @backstage/plugin-scaffolder > @uiw/react-codemirror > @uiw/codemirror-extensions-basic-setup > @codemirror/autocomplete@6.7.1" has unmet peer dependency "@lezer/common@^1.0.0".
warning Workspaces can only be enabled in private projects.
warning Workspaces can only be enabled in private projects.
warning Workspaces can only be enabled in private projects.
error Could not write file "/projects/yarn-error.log": "ENOSPC: no space left on device, open '/projects/yarn-error.log'"
error An unexpected error occurred: "ENOSPC: no space left on device, copyfile '/opt/app-root/src/.cache/yarn/v6/npm-date-fns-2.30.0-f367e644839ff57894ec6ac480de40cae4b0f4d0-integrity/node_modules/date-fns/esm/locale/lv/_lib/localize/index.js' -> '/projects/node_modules/date-fns/esm/locale/lv/_lib/localize/index.js'".
info Visit https://yarnpkg.com/en/docs/cli/install for documentation about this command.
Error occurred on Push - watch command was unable to push component: unable to exec command [/bin/sh -c cd ${PROJECT_SOURCE} && (yarn install) 1>>/proc/1/fd/1 2>>/proc/1/fd/2]: error while streaming command: command terminated with exit code 1

Currently, odo uses 2G PVC for /projects; the problem with that is that node_modules for larger projects can grow beyond that.

odo should allow users to define a bigger volume for source code

The text was updated successfully, but these errors were encountered:

rm3l · 2023-05-23T13:52:45Z

😨 Wow - that's a lot! Reminds me of this ^^

Just kidding - can you share the Devfile you used?

I tried to run odo init on this Project, but it seems Alizer panic'ed:

odo init logs

$ odo init                                                                                                                                                                                     
  __                                                                                                                                                                                           
 /  \__     Initializing a new component                                                                                                                                                       
 \__/  \    Files: Source code detected, a Devfile will be determined based upon source code autodetection                                                                                     
 /  \__/    odo version: v3.10.0                                                                                                                                                               
 \__/                                                                                                                                                                                          
                                                                                                                                                                                               
Interactive mode enabled, please answer the following questions:                                                                                                                               
 ✓  Determining a Devfile for the current directory [4s]                                                                                                                                       
panic: regexp: Compile("(let|const|var)\\s+{\n      onUnhandledRequest: ({ headers }\\s*=\\s*([^;]*)"): error parsing regexp: missing closing ): `(let|const|var)\s+{                          
      onUnhandledRequest: ({ headers }\s*=\s*([^;]*)`

goroutine 71 [running]:
regexp.MustCompile({0xc000b4bc70, 0x48})
        /home/asoro/.asdf/installs/golang/1.19.6/go/src/regexp/regexp.go:319 +0xbb
github.com/redhat-developer/alizer/go/pkg/apis/enricher/framework/javascript/nodejs.getPort({0xc000744c80, 0xc6d}, {0xc000b81d80, 0x111f11f?, 0x33acb6e?})
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/enricher/framework/javascript/nodejs/express_detector.go:86 +0x199
github.com/redhat-developer/alizer/go/pkg/apis/enricher/framework/javascript/nodejs.ExpressDetector.DoPortsDetection({}, 0xc0000c3a90, 0xd?)
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/enricher/framework/javascript/nodejs/express_detector.go:51 +0x20b
github.com/redhat-developer/alizer/go/pkg/apis/enricher.JavaScriptEnricher.DoEnrichComponent({}, 0xc0000c3a90, {{0xc00005c184, 0x1e}, {0xc000a98b10, 0x3, 0x3}}, 0x4cc5010?)
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/enricher/javascript_enricher.go:94 +0x5e8
github.com/redhat-developer/alizer/go/pkg/apis/recognizer.enrichComponent(0xc0000c3a90, {{0xc00005c184, 0x1e}, {0xc000a98b10, 0x3, 0x3}}, 0xc000492150?)
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/recognizer/component_recognizer.go:331 +0x89
github.com/redhat-developer/alizer/go/pkg/apis/recognizer.detectComponentByAnalyzingConfigFile({0xc000a33680, 0x41}, {0xc000867610, 0xa}, {{0xc00005c184, 0x1e}, {0xc000a98b10, 0x3, 0x3}}, 0xc000ac6050)
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/recognizer/component_recognizer.go:303 +0x3ae
github.com/redhat-developer/alizer/go/pkg/apis/recognizer.detectComponentUsingConfigFile({0xc000a33680, 0x41}, {0xc00080de40?, 0x2, 0x2}, {{0xc00005c184, 0x1e}, {0xc000a98b10, 0x3, 0x3}}, ...)
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/recognizer/component_recognizer.go:316 +0x15a
github.com/redhat-developer/alizer/go/pkg/apis/recognizer.DetectComponentsFromFilesList({0xc0010b6000, 0x2b50, 0xc000ac6050?}, {{0xc00005c184, 0x1e}, {0xc000a98b10, 0x3, 0x3}}, 0xc000a98b10?)
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/recognizer/component_recognizer.go:229 +0x327
github.com/redhat-developer/alizer/go/pkg/apis/recognizer.detectComponentsWithSettings({{0xc00005c184, 0x1e}, {0xc000a98b10, 0x3, 0x3}}, 0x4b4e680?)
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/recognizer/component_recognizer.go:86 +0xa5
github.com/redhat-developer/alizer/go/pkg/apis/recognizer.detectComponentsWithPathAndPortStartegy(...)
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/recognizer/component_recognizer.go:55
github.com/redhat-developer/alizer/go/pkg/apis/recognizer.DetectComponents({0xc00005c184, 0x1e})
        /home/asoro/work/projects/odo/vendor/github.com/redhat-developer/alizer/go/pkg/apis/recognizer/component_recognizer.go:34 +0xd1
github.com/redhat-developer/odo/pkg/alizer.(*Alizer).DetectPorts(0x34442f0?, {0xc00005c184, 0x1e})
        /home/asoro/work/projects/odo/pkg/alizer/alizer.go:128 +0x2d
github.com/redhat-developer/odo/pkg/init/backend.(*AlizerBackend).SelectDevfile.func1.1(0xc000699ae0, {0x380a598, 0xc000992fc0}, {0xc00005c184, 0x1e})
        /home/asoro/work/projects/odo/pkg/init/backend/alizer.go:57 +0x3af
github.com/redhat-developer/odo/pkg/init/backend.(*AlizerBackend).SelectDevfile.func1()
        /home/asoro/work/projects/odo/pkg/init/backend/alizer.go:80 +0x36
created by github.com/redhat-developer/odo/pkg/init/backend.(*AlizerBackend).SelectDevfile
        /home/asoro/work/projects/odo/pkg/init/backend/alizer.go:46 +0x12a

rm3l · 2023-06-29T12:28:03Z

Grooming (Jun 29, 2023):

Flag to set the /projects volume size: --projects-volume-size

github-actions · 2023-09-28T00:19:14Z

A friendly reminder that this issue had no activity for 90 days. Stale issues will be closed after an additional 30 days of inactivity.

github-actions · 2023-12-28T00:20:36Z

A friendly reminder that this issue had no activity for 90 days. Stale issues will be closed after an additional 30 days of inactivity.

openshift-ci bot added the kind/bug Categorizes issue or PR as related to a bug. label May 23, 2023

github-actions bot added the needs-triage Indicates an issue or PR lacks a `triage/*` and requires one. label May 23, 2023

kadel changed the title ~~Unable to use odo with larger NodeJS project.~~ Unable to use odo with complex NodeJS project. May 23, 2023

kadel changed the title ~~Unable to use odo with complex NodeJS project.~~ Unable to use odo with complex NodeJS project (big number of dependencies) May 23, 2023

rm3l mentioned this issue May 23, 2023

Regular expressions in port detection might panic redhat-developer/alizer#220

Closed

rm3l mentioned this issue Jun 21, 2023

Update Alizer to fix issue when analyzing large projects #6921

Closed

rm3l added area/dev Issues or PRs related to `odo dev` needs-triage Indicates an issue or PR lacks a `triage/*` and requires one. and removed needs-triage Indicates an issue or PR lacks a `triage/*` and requires one. labels Jun 29, 2023

rm3l removed the needs-triage Indicates an issue or PR lacks a `triage/*` and requires one. label Jun 29, 2023

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Unable to use odo with complex NodeJS project (big number of dependencies) #6836

Unable to use odo with complex NodeJS project (big number of dependencies) #6836

kadel commented May 23, 2023 •

edited

rm3l commented May 23, 2023 •

edited

rm3l commented Jun 29, 2023

github-actions bot commented Sep 28, 2023

github-actions bot commented Dec 28, 2023

Unable to use odo with complex NodeJS project (big number of dependencies) #6836

Unable to use odo with complex NodeJS project (big number of dependencies) #6836

Comments

kadel commented May 23, 2023 • edited

What versions of software are you using?

How did you run odo exactly?

Actual behavior

rm3l commented May 23, 2023 • edited

rm3l commented Jun 29, 2023

github-actions bot commented Sep 28, 2023

github-actions bot commented Dec 28, 2023

kadel commented May 23, 2023 •

edited

rm3l commented May 23, 2023 •

edited