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hpo.yaml
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hpo.yaml
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id: hpo
source: 'Human Phenotype Ontology (HPO)'
source-link: 'http://human-phenotype-ontology.github.io'
status: complete
description: 'A curated database of human hereditary syndromes from OMIM, Orphanet, and DECIPHER mapped to classes of the human phenotype ontology. Various meta-attributes such as frequency, references and negations are associated with each annotation. These are presently limited to rare mendelian diseases.'
data-field: biology
data-type: human
data-categories:
- 'disease-phenotype association'
data-access:
- type: download
location: http://human-phenotype-ontology.github.io/downloads.html
license: custom
license-type: restrictive
license-link: 'http://human-phenotype-ontology.github.io/license.html'
license-issues:
- criteria: A.2.2
comment: HPO is copyrighted to protect ontologies and all changes must be made by hpo developers.
- criteria: D.1.2
comment: Restricted downstream use. May not be edited.
- criteria: E.1.2
comment: Restricted downstream use translates to agents as well.
license-commentary:
- immutability
- unclear derivatives
- 'That the Human Phenotype Ontology Consortium is acknowledged and cited properly.'
- 'That neither the content of the HPO file(s) nor the logical relationships embedded within the HPO file(s) be altered in any way.'
contacts:
- 'http://human-phenotype-ontology.github.io/contact.html'