probability-algs.md

Probability Distribution Commands

Reading in device data and fitting it

 readInCSVFile

transformToFidelity

fitTheFidelities

convertAndProject

Projecting probabilities and marginalising probability distributions

projectSimplex

marginalise

Measuring correlations and various other metrics

covarianceMatrix

correlationMatrix

mutualInformation(p1,p2,p)

 relativeEntropy(P,Q)

JSD(dist1,dist2)

conditionalMutualInfo(X,Y,Z,p)

Gibbs Random Fields (one dimensional)

gibbsRandomField

gibbsRandomField(pps,constraints::Array{Array{Array{Any,1},1},1})

getGrainedP(ϕ,tomatch,graining)

reconstruct(dist,constraints)

reconstructedJS(distribution,constraints)

marginaliseFromRawData