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Can you add a resume option to platanus-allee? #1

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xiekunwhy opened this issue Sep 18, 2020 · 0 comments
Open

Can you add a resume option to platanus-allee? #1

xiekunwhy opened this issue Sep 18, 2020 · 0 comments

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@xiekunwhy
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Hi @rkajitani

Platanus-allee is a good assembler. But it is very slow and memory consuming for large and complex plant genomes (genome size is ~3.6G). The most maddening thing is that we need to rerun from the very beginning if the program is interrupted (like power failure), can you add an option to resume the running from the last normal step (very usefull in phasing stage)?

Best,
Kun

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