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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(adjustTableDepth)
export(analyzeComplexity)
export(analyzeLegacyTileseqCounts)
export(biasCorrection)
export(buildJointTable)
export(buildSimplifiedMarginal)
export(calcDepthDrops)
export(calcEnrichment)
export(calculateFits)
export(charProfile)
export(checkCSV)
export(collapseByAA)
export(countAttributes)
export(csvParam2Json)
export(drawComplexity)
export(drawCoverageMap)
export(drawNucleotideBias)
export(drawPositionalDepth)
export(dropoutAnalysis)
export(enactScale)
export(expectedError)
export(exportExperiment)
export(exportRawAssay)
export(exportSeqSample)
export(filterVariants)
export(findQuads)
export(fluorScore)
export(getNonselectFor)
export(getNonselects)
export(getNsConditions)
export(getPivotOverrides)
export(getSelects)
export(getTimepointsFor)
export(getWTControlFor)
export(getWTReps)
export(inferTiles)
export(joinRawInputs)
export(latestSubDir)
export(legacyCountConverter)
export(libraryQC)
export(libraryQCLegacy)
export(logInfo)
export(logPhiBias)
export(logVersion)
export(logWarn)
export(mavedbCountExport)
export(mut_breakdown)
export(parseCountFile)
export(parseCoverageFile)
export(parseParameters)
export(pdftagger)
export(plotCoverageCurve)
export(plotDepthDrops)
export(plotFrameshiftHotspot)
export(plotJackpotDiagnosis)
export(plotMutbreakdown)
export(plotReplicateCorrelation)
export(plotSeqErrorRates)
export(plotWTCtrl)
export(reachableChanges)
export(regionCensus)
export(registerLogger)
export(residualError)
export(scaleScores)
export(selectionQC)
export(simulateAssay)
export(simulateExperiment)
export(simulateFitness)
export(simulatePool)
export(simulateTileSeq)
export(slide)
export(splitCodonChanges)
export(tileCensus)
export(tilesInRegions)
export(validateParameters)