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reaction node labels lost in translation #7

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ghost opened this issue May 23, 2018 · 1 comment
Open

reaction node labels lost in translation #7

ghost opened this issue May 23, 2018 · 1 comment

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@ghost
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ghost commented May 23, 2018

Hi

I noticed that the reaction node labels, i.e. the reaction names like "PGMT" do not get transferred to the GraphML files produced. It is captured in the SBGN but not the GraphML

Step1_ReconMap_2.01_Original.xml
image

Step2_ReconMap_SBGN_from_CellDesigner.sbgn, PGMT is node="pr_4e79f0a2-236d-4abd-918e-2a94b664eb90"
image

Step3_ReconMap_yEd_from_SBGN.graphml
image

Thank you.
@royludo
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royludo commented Jun 17, 2018

@kengcher are you sure this issue is related to cd2sbgnml and not something that happens during GraphML conversion ? GraphML is outside of the scope of this repository.

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