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Would like to say firstly that I've been trying basically every assembler I can find for my genome, and so far SMARTdenovo has given one of the best assemblies from initial statistics, so I'm very interested in the development of SMARTdenovo and/or this wtdbg assembler!
On topic: When running run_wtdbg_assembly.sh with "-T > sub_script.sh", the output script has a typo which causes an error in the first uncommented line (--rescure-low-cov-edges). Manually editing this line fixes the issue.
I'll let you know how the assembly goes, unsure exactly how long it should take with the resources I have available.
Zac.
The text was updated successfully, but these errors were encountered:
Hi,
Would like to say firstly that I've been trying basically every assembler I can find for my genome, and so far SMARTdenovo has given one of the best assemblies from initial statistics, so I'm very interested in the development of SMARTdenovo and/or this wtdbg assembler!
On topic: When running run_wtdbg_assembly.sh with "-T > sub_script.sh", the output script has a typo which causes an error in the first uncommented line (--rescure-low-cov-edges). Manually editing this line fixes the issue.
I'll let you know how the assembly goes, unsure exactly how long it should take with the resources I have available.
Zac.
The text was updated successfully, but these errors were encountered: