link error undefined symbols for x86_64

[bwang2453]

Tried to compile it on Mojave. I have installed HDF5 from Homebrew and source. Both produced the same following error message.

[ 77%] Linking CXX shared library ../../lib/libcaffe.dylib
Undefined symbols for architecture x86_64:
"_H5LTfind_dataset", referenced from:
caffe::SGDSolver::RestoreSolverStateFromHDF5(std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&) in solver.cpp.o
caffe::SGDSolver::RestoreSolverStateFromHDF5(std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&) in solver.cpp.o
void caffe::hdf5_load_nd_dataset_helper(long long, char const*, int, int, caffe::Blob) in hdf5.cpp.o
void caffe::hdf5_load_nd_dataset_helper(long long, char const, int, int, caffe::Blob) in hdf5.cpp.o
"_H5LTget_dataset_info", referenced from:
void caffe::hdf5_load_nd_dataset_helper(long long, char const, int, int, caffe::Blob) in hdf5.cpp.o
void caffe::hdf5_load_nd_dataset_helper(long long, char const, int, int, caffe::Blob) in hdf5.cpp.o
caffe::hdf5_load_string(long long, std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&) in hdf5.cpp.o
"_H5LTget_dataset_ndims", referenced from:
void caffe::hdf5_load_nd_dataset_helper(long long, char const, int, int, caffe::Blob) in hdf5.cpp.o
void caffe::hdf5_load_nd_dataset_helper(long long, char const, int, int, caffe::Blob) in hdf5.cpp.o
"_H5LTmake_dataset_double", referenced from:
void caffe::hdf5_save_nd_dataset(long long, std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&, caffe::Blob const&, bool) in hdf5.cpp.o
"_H5LTmake_dataset_float", referenced from:
void caffe::hdf5_save_nd_dataset(long long, std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&, caffe::Blob const&, bool) in hdf5.cpp.o
"_H5LTmake_dataset_int", referenced from:
caffe::hdf5_save_int(long long, std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&, int) in hdf5.cpp.o
"_H5LTmake_dataset_string", referenced from:
caffe::hdf5_save_string(long long, std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&, std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&) in hdf5.cpp.o
"_H5LTread_dataset_double", referenced from:
void caffe::hdf5_load_nd_dataset(long long, char const, int, int, caffe::Blob) in hdf5.cpp.o
"_H5LTread_dataset_float", referenced from:
void caffe::hdf5_load_nd_dataset(long long, char const, int, int, caffe::Blob*) in hdf5.cpp.o
"_H5LTread_dataset_int", referenced from:
caffe::hdf5_load_int(long long, std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&) in hdf5.cpp.o
"_H5LTread_dataset_string", referenced from:
caffe::hdf5_load_string(long long, std::__1::basic_string<char, std::__1::char_traits, std::__1::allocator > const&) in hdf5.cpp.o
ld: symbol(s) not found for architecture x86_64
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make[2]: *** [lib/libcaffe.dylib] Error 1
make[1]: *** [src/caffe/CMakeFiles/caffe.dir/all] Error 2
make: *** [all] Error 2