-
Notifications
You must be signed in to change notification settings - Fork 113
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
cannot complete assign_ligands_to_celltype #268
Comments
fixed the issue after debugging through the source code (application_visualization.R). Also detected additional bugs! Line 831, set_rownames(ligands). This line needs to be deleted. Line 844, A conditional flow in the following will mitigate such error |
Hi @shawnshu1, I looked into the names mismatch, and it seems to be due to the different behavior of
I was not aware of this until now, and I will proceed to check other This issue will automatically be closed once I merge the PR, but feel free to reopen this should you still encounter bugs. |
finished nichenet_output, and trying to run assign_ligands_to_celltype for circos plot.
error message,
Error in data.frame(ligand_type = sender, ligand = unique_ligands_sender) :
arguments imply differing number of rows: 1, 0
The text was updated successfully, but these errors were encountered: