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GST.AnalysisTools.DirectChiSqMatrix.html
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GST.AnalysisTools.DirectChiSqMatrix.html
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<h1>GST.AnalysisTools.DirectChiSqMatrix<a class="headerlink" href="#gst-analysistools-directchisqmatrix" title="Permalink to this headline">¶</a></h1>
<dl class="function">
<dt id="GST.AnalysisTools.DirectChiSqMatrix">
<code class="descclassname">GST.AnalysisTools.</code><code class="descname">DirectChiSqMatrix</code><span class="sig-paren">(</span><em>sigma</em>, <em>dataset</em>, <em>directGateset</em>, <em>strs</em>, <em>minProbClipForWeighting=0.0001</em>, <em>rhoEPairs=None</em><span class="sig-paren">)</span><a class="headerlink" href="#GST.AnalysisTools.DirectChiSqMatrix" title="Permalink to this definition">¶</a></dt>
<dd><p>Computes the Direct-X chi^2 matrix for a base gatestring sigma.</p>
<p>Similar to ChiSqMatrix, except the probabilities used to compute
chi^2 values come from using the “composite gate” of directGatesets[sigma],
a GateSet assumed to contain some estimate of sigma stored under the
gate label “sigmaLbl”.</p>
<table class="docutils field-list" frame="void" rules="none">
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
<li><strong>sigma</strong> (<em>GateString or tuple of gate labels</em>) – The gate sequence that is sandwiched between each rhoStr and EStr</li>
<li><strong>dataset</strong> (<a class="reference internal" href="GST.DataSet.html#GST.DataSet" title="GST.DataSet"><em>DataSet</em></a>) – The data used to specify frequencies and counts</li>
<li><strong>directGateset</strong> (<a class="reference internal" href="GST.GateSet.html#GST.GateSet" title="GST.GateSet"><em>GateSet</em></a>) – GateSet which contains an estimate of sigma stored
under the gate label “sigmaLbl”.</li>
<li><strong>strs</strong> (<em>2-tuple</em>) – A (rhoStrs,EStrs) tuple usually generated by calling getRhoAndEStrs(...)</li>
<li><strong>minProbClipForWeighting</strong> (<em>float, optional</em>) – defines the clipping interval for the statistical weight (see ChiSqFunc).</li>
<li><strong>rhoEPairs</strong> (<em>list, optional</em>) – A list of (iRhoStr,iEStr) tuples specifying a subset of all the rhoStr,EStr
pairs to include in the matrix. Other elements are set to NaN.</li>
</ul>
</td>
</tr>
<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first">Direct-X chi^2 values corresponding to gate sequences where
gateString is sandwiched between the each (EStr,rhoStr) pair.</p>
</td>
</tr>
<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last">numpy array of shape ( len(EStrs), len(rhoStrs) )</p>
</td>
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</tbody>
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