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GSTCommons.Analyze_TruncatedGermPowers.doMLEAnalysis.html
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<div class="section" id="gstcommons-analyze-truncatedgermpowers-domleanalysis">
<h1>GSTCommons.Analyze_TruncatedGermPowers.doMLEAnalysis<a class="headerlink" href="#gstcommons-analyze-truncatedgermpowers-domleanalysis" title="Permalink to this headline">¶</a></h1>
<dl class="function">
<dt id="GSTCommons.Analyze_TruncatedGermPowers.doMLEAnalysis">
<code class="descclassname">GSTCommons.Analyze_TruncatedGermPowers.</code><code class="descname">doMLEAnalysis</code><span class="sig-paren">(</span><em>dataFilenameOrSet</em>, <em>targetGateFilenameOrSet</em>, <em>rhoStrsListOrFilename</em>, <em>EStrsListOrFilename</em>, <em>germsListOrFilename</em>, <em>maxLengths</em>, <em>gateLabelsInStrings=None</em>, <em>weightsDict=None</em>, <em>rhoEPairs=None</em>, <em>constrainToTP=False</em>, <em>gaugeOptToCPTP=False</em>, <em>gaugeOptRatio=0.0001</em>, <em>advancedOptions={}</em><span class="sig-paren">)</span><a class="headerlink" href="#GSTCommons.Analyze_TruncatedGermPowers.doMLEAnalysis" title="Permalink to this definition">¶</a></dt>
<dd><p>Perform end-to-end maximum-likelihood analysis using Ls and germs, with L as a maximum length.</p>
<p>Constructs gate strings by repeating germ strings an integer number of times
such that the length of the repeated germ is less than or equal to the
maximum length set in maxLengths. The LGST estimate of the gates is computed,
gauge optimized, and then and used as the seed for MLEGST.</p>
<p>MLEGST is iterated len(maxLengths) times with successively larger sets of gate
strings. On the i-th iteration, the repeated germs sequences limited by
maxLengths[i] are included in the growing set of strings used by MLEGST.</p>
<p>Once computed, the MLEGST gate set estimates are gauge optimized to the
CPTP space (if gaugeOptToCPTP == True) and then to the target gate set
(using gaugeOptRatio). A Results object is returned, which encapsulates the
input and outputs of this GST analysis, and can to generate final end-user
output such as reports and presentations.</p>
<table class="docutils field-list" frame="void" rules="none">
<col class="field-name" />
<col class="field-body" />
<tbody valign="top">
<tr class="field-odd field"><th class="field-name">Parameters:</th><td class="field-body"><ul class="first simple">
<li><strong>dataFilenameOrSet</strong> (<em>DataSet or string</em>) – The data set object to use for the analysis, specified either directly
or by the filename of a dataset file (in text format).</li>
<li><strong>targetGateFilenameOrSet</strong> (<em>GateSet or string</em>) – The target gate set, specified either directly or by the filename of a
gateset file (text format).</li>
<li><strong>rhoStrsListOrFilename</strong> (<em>(list of GateStrings) or string</em>) – The state preparation fiducial gate strings, specified either directly
or by the filename of a gate string list file (text format).</li>
<li><strong>EStrsListOrFilename</strong> (<em>(list of GateStrings) or string or None</em>) – The measurement fiducial gate strings, specified either directly
or by the filename of a gate string list file (text format). If None,
then use the same strings as specified by rhoStrsListOrFilename.</li>
<li><strong>germsListOrFilename</strong> (<em>(list of GateStrings) or string</em>) – The germ gate strings, specified either directly or by the filename of a
gate string list file (text format).</li>
<li><strong>maxLengths</strong> (<em>list of ints</em>) – List of the integers, one per LGST iteration, which set truncation lengths
for repeated germ strings. The list of gate strings for the i-th LSGST
iteration includes the repeated germs truncated to the L-values <em>up to</em>
and including the i-th one.</li>
<li><strong>gateLabelsInStrings</strong> (<em>list or tuple</em>) – A list or tuple of the gate labels to use when generating the sets of
gate strings used in LSGST iterations. If None, then the gate labels
of the target gateset will be used. This option is useful if you
only want to include a <em>subset</em> of the available gates in the LSGST
strings (e.g. leaving out the identity gate).</li>
<li><strong>weightsDict</strong> (<em>dict, optional</em>) – A dictionary with keys == gate strings and values == multiplicative scaling
factor for the corresponding gate string. The default is no weight scaling at all.</li>
<li><strong>rhoEPairs</strong> (<em>list of 2-tuples, optional</em>) – Specifies a subset of all rhoStr,EStr string pairs to be used in this
analysis. Each element of rhoEPairs is a (iRhoStr, iEStr) 2-tuple of integers,
which index a string within the state preparation and measurement fiducial
strings respectively.</li>
<li><strong>constrainToTP</strong> (<em>bool, optional</em>) – Whether to constrain GST to trace-preserving gatesets.</li>
<li><strong>gaugeOptToCPTP</strong> (<em>bool, optional</em>) – If True, resulting gate sets are first optimized to CPTP and then to the target.
If False, gate sets are only optimized to the target gate set.</li>
<li><strong>gaugeOptRatio</strong> (<em>float, optional</em>) – The ratio spamWeight/gateWeight used for gauge optimizing to the target gate set.</li>
<li><strong>advancedOptions</strong> (<em>dict, optional</em>) – Specifies advanced options most of which deal with numerical details of the
objective function. The ‘verbosity’ option is an integer specifying the level
of detail printed to stdout during the GST calculation.</li>
</ul>
</td>
</tr>
<tr class="field-even field"><th class="field-name">Returns:</th><td class="field-body"><p class="first"></p>
</td>
</tr>
<tr class="field-odd field"><th class="field-name">Return type:</th><td class="field-body"><p class="first last"><a class="reference internal" href="GST.Results.html#GST.Results" title="GST.Results">Results</a></p>
</td>
</tr>
</tbody>
</table>
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