better version mechanics

.github/workflows/docs.sh

@@ -3,13 +3,11 @@
 mkdir docs-temp/
 mv docs/* docs-temp/
 cd docs/
-export VERSION=$(grep version ../setup.py | cut -f2 -d "'")
+export VERSION=$(grep __version__ ../ufjc/__init__.py | cut -f2 -d '"')
 sphinx-quickstart --sep -p ufjc -l en -a 'Michael R. Buche, Scott J. Grutzik' -r ${VERSION} -v ${VERSION}
 sphinx-apidoc -e -P -o source ../ ../*setup*
 mv ../docs-temp/* source/
 rm -r ../docs-temp/
-echo "release = '${VERSION}'" >> source/conf.py
-echo "version = '${VERSION}'" >> source/conf.py
 for file in ../ufjc/*.py; do 
     export file_basename=$(basename ${file%.*})
     export rst_file=$(echo "source/*`basename ${file%.*}`.rst")

docs/conf.py

@@ -1,8 +1,24 @@
-import os
+import re
 import sys
-sys.path.insert(0, os.path.abspath("../../"))
+from os.path import join, abspath
+sys.path.insert(0, abspath("../../"))
+
+
+def get_version():
+    VERSIONFILE = join('..', '..', 'ufjc', '__init__.py')
+    with open(VERSIONFILE, 'rt') as f:
+        lines = f.readlines()
+    vgx = '^__version__ = \"[0-9+.0-9+.0-9+]*[a-zA-Z0-9]*\"'
+    for line in lines:
+        mo = re.search(vgx, line, re.M)
+        if mo:
+            return mo.group().split('"')[1]
+    raise RuntimeError('Unable to find version in %s.' % (VERSIONFILE,))
+
 
 project = 'uFJC'
+version = get_version()
+release = version
 author = 'Michael R. Buche, Scott J. Grutzik'
 copyright = '2022 National Technology & Engineering Solutions of Sandia, \
     LLC (NTESS). Under the terms of Contract DE-NA0003525 with NTESS, \

setup.py

@@ -1,3 +1,5 @@
+import re
+from os.path import join
 from distutils.core import setup
 from setuptools import find_packages
 
@@ -8,9 +10,21 @@ def read(fname):
     return content
 
 
+def get_version():
+    VERSIONFILE = join('ufjc', '__init__.py')
+    with open(VERSIONFILE, 'rt') as f:
+        lines = f.readlines()
+    vgx = '^__version__ = \"[0-9+.0-9+.0-9+]*[a-zA-Z0-9]*\"'
+    for line in lines:
+        mo = re.search(vgx, line, re.M)
+        if mo:
+            return mo.group().split('"')[1]
+    raise RuntimeError('Unable to find version in %s.' % (VERSIONFILE,))
+
+
 setup(
     name='ufjc',
-    version='1.3.1',
+    version=get_version(),
     package_dir={'ufjc': 'ufjc'},
     packages=find_packages(),
     description='The Python package for the uFJC single-chain model.',

ufjc/__init__.py

@@ -1,2 +1,4 @@
 from .core import *
 from .swfjc import *
+
+__version__ = "1.3.1"